Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1536 ATGGGGAAGAAGAAGAGAAGTAGGGTTTCCGAAGACGAGGAAATCGAATCTGACACCAACCCTTTCGATCAAAACGAACACACTCTCTACCAGGTTCTTGGTGTGGAGAAAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCCGGCGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAAAACGTTATCGCTATTCTTGGGGATGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGGTCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCTCACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAGAAATCAAGCCACCAACTAGTCCCTTAAGAAGGCAGGCAAAATCATCAAATAAGCAACCAGAAAAAGATCTGTATGCTATCATATCACAACGCAAACATGAGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGGTGGAAAGCGGAAGGTCCTCAAAAAAGTCGAAGCAAAAATAG 843 0.4116 MGKKKRSRVSEDEEIESDTNPFDQNEHTLYQVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVIAILGDEEKRAVYDQTGCVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDIIDEVIAAGELKETKAYKKWAKKISEIKPPTSPLRRQAKSSNKQPEKDLYAIISQRKHERKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVESGRSSKKSKQK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1536 280 Pfam DnaJ domain 29 90 IPR001623 -
Gso2g1536 280 MobiDBLite consensus disorder prediction 201 222 - -
Gso2g1536 280 MobiDBLite consensus disorder prediction 1 15 - -
Gso2g1536 280 PRINTS DnaJ domain signature 30 48 IPR001623 -
Gso2g1536 280 PRINTS DnaJ domain signature 48 63 IPR001623 -
Gso2g1536 280 PRINTS DnaJ domain signature 65 85 IPR001623 -
Gso2g1536 280 PRINTS DnaJ domain signature 85 104 IPR001623 -
Gso2g1536 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 280 IPR042977 -
Gso2g1536 280 MobiDBLite consensus disorder prediction 1 23 - -
Gso2g1536 280 MobiDBLite consensus disorder prediction 245 280 - -
Gso2g1536 280 Gene3D DnaJ domain 14 114 IPR036869 -
Gso2g1536 280 MobiDBLite consensus disorder prediction 259 280 - -
Gso2g1536 280 CDD DnaJ 28 82 IPR001623 -
Gso2g1536 280 SUPERFAMILY Chaperone J-domain 26 99 IPR036869 -
Gso2g1536 280 ProSiteProfiles dnaJ domain profile. 28 93 IPR001623 -
Gso2g1536 280 SMART dnaj_3 27 85 IPR001623 -
Gso2g1536 280 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1536 Gso-Chr2 32416004 32419210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1536 30 90 C2H2 Transcription Factor Family AT1G74250 42.424 5.36e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1536 K09529 - gmx:100781463 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1189 19 40335690 40338607 Gso2g1536 2 32416004 32419210 PCT
Gso2g1536 2 32416004 32419210 Gso19g1189 19 40335690 40338607 PCT