Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1529 ATGGTTCGTAACGAAAGCAGCAACAAAGAGAAGGATAAAGACCTCGATCAGTTTTTGTTTGATCGGAACGACGATGATTTGGTCGATGAAGAACAACAGGAGATTGAAGGTGTGAAGTACGAGAGTGAGAGTAGTAGTGATGGTGACGACGCAAATCGGAGAGCACAGCCTGACTCTTTCTCTTCTCAGCAATGGCCTCAGAGTTACAAAGAGACTACAGATTCTTACACGATAGCTGCTGCTCCAAATTTTGAGTCAGTTCTACGGGGGCCAAGTTTCATATATTCAAGTTTTGACAATCGTTCAAAGAGTAACTTAGACATCGATGGAAAGACACCTTTTCTATCTGCTGCAGAAGGCATTAGACAATCAACTTGGTGGGAGAAAGCCTCGGTACAACGGCTTGTTTCTGGAGAATTGCCCATTGGATATGGATGCAGCTTCACTCAAACAATTTTCAATGGCATTAATGTGATGGCTGGAGTTGGTCTTCTATCTACGCCATACACAGTAAATCAAGCTGGGTGGATGAGCATGGCAGTGATGCTTCTTTTTGCAGTTATGTGTTGTTATACAGCCACCCTTTTGAGATACTGTTTTGAAAATAGGGAAGAAATCATTACCTACCCAGATATAGGAGAAGCCGCATTTGGGAGATATGGTCGAATTGCTGTCTCGATCATTTTGTACACTGAACTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAATCTCACTAGTCTGTTTCCTGGTACATCCTTAGATTTGGGTGGTTTCCAGTTAGACTCGATGCATTTGTTTGGAGTTTTGACAGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGTATAATCTCTTATCTATCAGCTGGAGGGGTTATTGCAACAGTTTTGATTATTATTTGCGTGTTTTGTGTTGGAACAATAGACGGTGTCGGATTCCATCACACGGGTCAATTGGTAAAATGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAAAAACAATTTACCAAAGCACTAATAATATGTTTTGTTTTGTGTGTTTTGATATATGGAGGCACTGCAATCATGGGATATCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGCACATTTGCTTCCAAAGTTGCATTGTGGACAACAGTTATTAACCCGTTGACTAAATATGCTTTGTTGATGAACCCACTGGCAAGGAGTCTAGAGGAGTTGCTGCCAGATAGAATTTCATCCTCATATTGGTGCTTCATTCTTCTTAGGACAACACTTGTTGCATCTACAGTTTGTGTTGCCTTTTTGGTTCCCTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTCTTTAGTATACTTGTGTCAGCGATAATGCCAAGTTTATGTTTTCTGAAAATTATTGGGAAAAAAGCTACAAGGACACAGGTTGTACTCAGTGTTGCAATTGCTGCATTCGGAGTCATTTGTGGAATCCTTGGAACATATTCCTCTCTGTTGAGTATCGCTGATAGTTACTGA 1605 0.4056 MVRNESSNKEKDKDLDQFLFDRNDDDLVDEEQQEIEGVKYESESSSDGDDANRRAQPDSFSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFDNRSKSNLDIDGKTPFLSAAEGIRQSTWWEKASVQRLVSGELPIGYGCSFTQTIFNGINVMAGVGLLSTPYTVNQAGWMSMAVMLLFAVMCCYTATLLRYCFENREEIITYPDIGEAAFGRYGRIAVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGFQLDSMHLFGVLTALIILPTVWLKDLRIISYLSAGGVIATVLIIICVFCVGTIDGVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALIICFVLCVLIYGGTAIMGYLMFGDGTLSQITLNMPPGTFASKVALWTTVINPLTKYALLMNPLARSLEELLPDRISSSYWCFILLRTTLVASTVCVAFLVPFFGLVMALIGSLFSILVSAIMPSLCFLKIIGKKATRTQVVLSVAIAAFGVICGILGTYSSLLSIADSY* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1529 534 PANTHER OS05G0424000 PROTEIN-RELATED 39 532 - -
Gso2g1529 534 MobiDBLite consensus disorder prediction 1 68 - -
Gso2g1529 534 Gene3D Amino acid/polyamine transporter I 145 532 - -
Gso2g1529 534 PANTHER AMINO ACID TRANSPORTER AVT1A 39 532 - -
Gso2g1529 534 MobiDBLite consensus disorder prediction 1 22 - -
Gso2g1529 534 MobiDBLite consensus disorder prediction 33 54 - -
Gso2g1529 534 Pfam Transmembrane amino acid transporter protein 147 526 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1529 Gso-Chr2 32113218 32119522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1529 39 469 Amino Acid or Auxin Permease AAAP Family AT2G41190 67.634 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1529 K15015 - gmx:100790344 1067.76