Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1519 ATGTATCATTTTTCGCAGGTATCAAACGGAGCACACAGCAATGAAGCCGACGTTGGAGGCTCAGAAAAAGACAGCTTCAACTTCCAACGACATGTGTTCGATGTTCCTTTTTCGTGTTTGAAGTTCTATTCACAAAATTTGCTGTGCCAATCTTCTCGGAACGACTCTGCTCCAATGTTCGGAAGTGTTGTTGATTCTTTCTTGTCTAGTGATGAAGACACGTTTTGTGAAACGTATAGAGAATATAGTGAACTTCCTTGCCATGACGTGTCACTTTATGAGCATTTCAGACACGAAGAGAAAAGATTGGAGGGTGATGATTCTGCCCCAGTTATTGAGGCTGAAGTTGTTTGTGCCACTTCTGGAAACTCTGCTTCTAGCATGGTACCAACTAGGAAAAATAGAATAAAATGGACCAAAGATTTGCATGAGCAATTTGTTGCAGCTGTCAACAGCCTTGGTGGTCCTCAAAAAGCAAAACCCAAGGCAGTGCTACAGATGATGAATTCAAAGTCGCTCACCATTTTTCATGTTAAAAGTCACTTGCAGAAATATCGGACCACAATGTACATGCAGAACTCTAGCAAGGAGGGATACAAAGAAAGCAAAGGCATAGACATGGTCACTGAACTTCAACAGAAAATAATTATACTTCTGGCAGCTATATGCAAATTGAGGAATCAAGACTACTGCAACTTGAGATTGGGAGAGGTATTCAAGAACAATTGGAGTTATCTTTTGTCTGCACTCACATTTAGATCTACGACGTCATATGATGAAGACCAAGAATCATTCTTTCAGGTGTCGACATTTTTTGTCATTGTCGTGATGCATCTTTATAACCATGTCGTCATCCTATATTGTTATTATGTTTCTATTGGGTGTACGTATTTATGCAAGCAAATGAAGCATGTTTTGTCATATTTTTCTAAAATATTTCTTTAA 945 0.3894 MYHFSQVSNGAHSNEADVGGSEKDSFNFQRHVFDVPFSCLKFYSQNLLCQSSRNDSAPMFGSVVDSFLSSDEDTFCETYREYSELPCHDVSLYEHFRHEEKRLEGDDSAPVIEAEVVCATSGNSASSMVPTRKNRIKWTKDLHEQFVAAVNSLGGPQKAKPKAVLQMMNSKSLTIFHVKSHLQKYRTTMYMQNSSKEGYKESKGIDMVTELQQKIIILLAAICKLRNQDYCNLRLGEVFKNNWSYLLSALTFRSTTSYDEDQESFFQVSTFFVIVVMHLYNHVVILYCYYVSIGCTYLCKQMKHVLSYFSKIFL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1519 314 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g1519 314 MobiDBLite consensus disorder prediction 1 15 - -
Gso2g1519 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 59 217 - -
Gso2g1519 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 187 IPR006447 GO:0003677
Gso2g1519 314 Pfam Myb-like DNA-binding domain 137 186 IPR001005 -
Gso2g1519 314 Gene3D - 132 191 - -
Gso2g1519 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 59 217 IPR044848 GO:0003700
Gso2g1519 314 SUPERFAMILY Homeodomain-like 131 187 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1519 Gso-Chr2 31371958 31375017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1519 121 208 G2-like Transcription Factor Family AT5G29000 53.409 1.35e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso2g1519 Myb_DNA-binding 2.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1519 - - gsj:114392463 632.869