Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1516 ATGCGACTCCAATGGGATCTGCTTCTTGGCATTCCTGGTCGCCATTTTCAGCTTCACCAGAGGGTAAAAGTCATTTGGATGTTTCGGAAGAGGATAGATTTCCTTGCTGCACAAAGCTCTCTATCAATATGGTATCAAAGGAAATACACTTCTTCTGCTTTCTCTGATTTCCTTCTAGCTTTTCTTCTCCTTTTTCTCTTTGGTTTCATGGGTGCCATGGATGATTCTAATCTCTTTCCCATACAAACCAGTGATAATCCTGGTTTGAGCCTCGTCACTCATCCTTTATCTGGAGAGAATTATAATTCTTGGAAGAAAGCCATCAAGATGGCACTTCTTGGCAAAAATAATTTGCTTTTGTGGATGTATTCAGATGTTGAACCCGTTGATATACCTGCTCCCAGTCAACGCAACGGTATTGAGCTACCAAAGAGGCAAGGGAACTGTAGAAGAAAGAAATGTGGTGGCAGCAGTCTTTCAGAGGATGCTGCTACTACTCTAATAAAGTTACTTTGTGAAGGTACTCCTACAGGTAAGAAGGATGCTGCTACTGCTATCTTCAACCTATCTATTTATCAGGGAAATAAACCAAGAGCTGTAAAAGCTGGTTTAGTAGCCCCACTGATTCAATTTTTGAAGGATGCTGGGGGTGGAATGGTAGATGAAGCAGTAGCTATTATGGCAATCCTTGCAAGCCACCATGAAGGCAGGGTAGCGATCGGTCAGGCCAAGCCAATTCATATTCTTATTGAGGTTATACGAACTAGCTCTCCACGCAATCGAGAGAATGCTGCTGCTGTCATGTGGTCACTATGCACCGGAGAACCACTACAATTAAAACTAGCGAAAGAACATGGTGCAGAAGCAGCACTGCAGGAGTTGTCAGAAAATGGAACTGATAGAGCTAAGATAAAAGCTAGAAGCATATTGGAACTCTTGTAG 942 0.4268 MRLQWDLLLGIPGRHFQLHQRVKVIWMFRKRIDFLAAQSSLSIWYQRKYTSSAFSDFLLAFLLLFLFGFMGAMDDSNLFPIQTSDNPGLSLVTHPLSGENYNSWKKAIKMALLGKNNLLLWMYSDVEPVDIPAPSQRNGIELPKRQGNCRRKKCGGSSLSEDAATTLIKLLCEGTPTGKKDAATAIFNLSIYQGNKPRAVKAGLVAPLIQFLKDAGGGMVDEAVAIMAILASHHEGRVAIGQAKPIHILIEVIRTSSPRNRENAAAVMWSLCTGEPLQLKLAKEHGAEAALQELSENGTDRAKIKARSILELL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1516 313 SUPERFAMILY ARM repeat 162 310 IPR016024 -
Gso2g1516 313 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 162 312 - -
Gso2g1516 313 PANTHER U BOX DOMAIN-CONTAINING 162 312 - -
Gso2g1516 313 Pfam gag-polypeptide of LTR copia-type 83 117 IPR029472 -
Gso2g1516 313 Gene3D - 152 313 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1516 Gso-Chr2 31260531 31271988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1516 167 313 U-box Gene Family AT3G54850 66.667 6.25e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1516 - - gsj:114374975 597.43