Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1514 ATGGTTCGCAACTATGTGTTCGTGAATCTTGTCCTCGTCCTTGTCTTCTCGGCAACTTTGGTTTCTCGGTGTTTCGCGTTTACGGATCCTCCTGACGTCACAGCTCTGCAGGATCTATACAGGGCCTTAAACAGCCCACCAGTGCTGAATGGATGGAACGGTAACGATCCTTGTGAGGAATCTTGGACTGGAGTAGCATGTTCTGGCTCATCAATTATACACCTCAAAATTCGTGGATTAAACCTTACCGGGTATCTTGGAGGCTTGCTCAATAATCTACAAAACTTGAAGCAACTAGATGTCAGTTCTAACAACATAATGGGTGAAATACCACTGGCTTTACCCCCAAATGCCACACATATGAATTTAAGCCATAATTTCTTGGATGGACCCATTGGCAATGTATTTACTGGCTTAGATGATCTCAAAGAAATGGACCTTTCGTACAATAATTTCACCGGTGATCTGCCCAGTTCATTTGGCACCTTGACAGGCCTTAATAGATTGTTCCTGCAGAATAACAGATTCACCGGATCAGTCACCTACCTGGCTGAGCTTCCACTCATTGATTTGAACATTCAAGATAATCTGTTCAGTGGCATTCTTCCACAGCCTTTTCAGTCCATACCAAACTTATGGATTGGAGGGAACAAGTTCCATGCATTAGACGACTCTCCTGCCTGGGCATTTCCTTTGGACAATGTACCCATTGAGCAAAACACTAGTCGCCCACCGATAACTCAGACGAATGCCGTCGAGAACTACGATCCTCCTAAAGTAAGGAAGCAAAAGAAGAAACGTATGGGTCCAGGAGGAATAGCTTTCATTGTTGGTGCAGGAACATTATTGGTGACAGGTTTTGCGCTCTTCATTGCGATCCGTTTGAATAAGCTCCATAGACAGAGAATGGAGGACTATGAAAGCAACCATAATCGTGCTTTTCTTTTTTTCTATCCATTTTTAATGGTGGTAGACGTCTCTACAACGGCAGTAGATGAGAGTCTGCAGATCCCACCTTACAATGCTGCATCCCTTTTGGGTCCAAGGCGATTAACTTCCCAGATCCATAAAAGAGCAGCAGGTGAAACATCAAGAAAAAGCTTTTCCGGAAGAGACAGATTCACTGGAAGGACAAAGGTTTATACAATAGCTGAGGTTCAGTTGGTTGCAAACAGTTTCCATGAAGACAACCTTCTGGGAGAGGGGTCACTAGGCCCTCTTTACAGAGCTGAATTTCCAGATAACAAGGTTTTAGCAGTGAAGAATATCAACATGGCTGGCATGTCTTTCAGTGAAGAGGAAAAGTTCTTAGACGTCGTTTGTACCGCTTCCCGTCTGAAGCACCCTAACATTGTTTCACTTAAAGGCTACTGCTTGGAGCATGGGCAGCATCTTCTTGTCTATGACTATGTCAGAAATTTAACTTTAGATGATGCTCTTCATTGTGCCGCGTACAAACCTTTATCGTGGAGCACACGTCTCAAAATTGCTTTAGGTGTTGGTCAGGCCCTGGACTATTTGCACTCGACATTCTCTCCTCCTGTCTCCCATGGAAACTTAAAGGCTACCAATGTTCTACTGGACGAAAATCTCATGCCTCGTCTTACTGACTGTGGCTTGGCTATTTTGAGACCGCTGACAAATGACAAAGTCAAAAATCGGGCTTCTGAGATTGAAATTAGGGATACAGGATACAGTTCACCTGACCATGGCCAACCGGCAATTGGCAGCACGAAGAGTGATACCTTTTCCTTTGGAGTGTTGCTTCTTGAACTATTAACAGGAAGAAAACCATTCGACGGTTCCAGGCCAAGGGAAGAGCAATATCTGGCAAAGTGGGCCTCATCAAGGCTTCATGATGGCGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAAAGGACGTTTTCCTCCAAGGCTCTCTCTCGGTATGCTGATATCATCTCCCTCTGCATTCAGCCTGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGGACTCTCTTGTATCGTTTTCTCAAAAGCTCGTTTCAAAGAGTGGTGCAGCAGATGGCACTGAACTTGATCCACTTGAGAGGTCTTTTCGCACTACCACCTCGCGCTTTATCGGTTCACCCGCATTGAGCTATGTATCTGCCTGA 2142 0.4482 MVRNYVFVNLVLVLVFSATLVSRCFAFTDPPDVTALQDLYRALNSPPVLNGWNGNDPCEESWTGVACSGSSIIHLKIRGLNLTGYLGGLLNNLQNLKQLDVSSNNIMGEIPLALPPNATHMNLSHNFLDGPIGNVFTGLDDLKEMDLSYNNFTGDLPSSFGTLTGLNRLFLQNNRFTGSVTYLAELPLIDLNIQDNLFSGILPQPFQSIPNLWIGGNKFHALDDSPAWAFPLDNVPIEQNTSRPPITQTNAVENYDPPKVRKQKKKRMGPGGIAFIVGAGTLLVTGFALFIAIRLNKLHRQRMEDYESNHNRAFLFFYPFLMVVDVSTTAVDESLQIPPYNAASLLGPRRLTSQIHKRAAGETSRKSFSGRDRFTGRTKVYTIAEVQLVANSFHEDNLLGEGSLGPLYRAEFPDNKVLAVKNINMAGMSFSEEEKFLDVVCTASRLKHPNIVSLKGYCLEHGQHLLVYDYVRNLTLDDALHCAAYKPLSWSTRLKIALGVGQALDYLHSTFSPPVSHGNLKATNVLLDENLMPRLTDCGLAILRPLTNDKVKNRASEIEIRDTGYSSPDHGQPAIGSTKSDTFSFGVLLLELLTGRKPFDGSRPREEQYLAKWASSRLHDGDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKEFRPPMSEIVDSLVSFSQKLVSKSGAADGTELDPLERSFRTTTSRFIGSPALSYVSA* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1514 713 Pfam Protein tyrosine and serine/threonine kinase 396 669 IPR001245 GO:0004672|GO:0006468
Gso2g1514 713 Gene3D Phosphorylase Kinase; domain 1 353 470 - -
Gso2g1514 713 Gene3D Transferase(Phosphotransferase) domain 1 472 686 - -
Gso2g1514 713 ProSiteProfiles Protein kinase domain profile. 393 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1514 713 Gene3D Ribonuclease Inhibitor 29 247 IPR032675 -
Gso2g1514 713 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Gso2g1514 713 SUPERFAMILY L domain-like 28 219 - -
Gso2g1514 713 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Gso2g1514 713 SUPERFAMILY Protein kinase-like (PK-like) 369 669 IPR011009 -
Gso2g1514 713 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 713 - -
Gso2g1514 713 PANTHER OS01G0253100 PROTEIN 2 713 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1514 Gso-Chr2 30994804 31004087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1514 14 713 Strubbelig Receptor Gene Family AT5G06820 51.482 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso2g1514 PK_Tyr_Ser-Thr 8.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1514 - - gmx:100816202 1389.79