Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1510 ATGGCTTCTTCAAGTGTTAAGGGAAATACCAACTCAACAACAACTCAAATTGAACCACTCCCCCCACCTTTACATCTTCATCATCAACCACCACAACATCATTTTCATCATCATCAAATACCAGACCAACAAATTTCTTTTGGAATGTTGCCATCTTCCTCGTCAGCCTCTATCCCAGGAAATTTCTTAAGCAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTTTTTTTGTATCTTGATGGTCAGGCTGACCCTTCTAGTGTTCAAGACCAAAAACGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTAACATGGGATTACCCTCCACACAAACCAGTACTGGCTCAAAGAGACAGCCAGAGACATCCATGGCCAAGCCCAAACCACACACCGAAGCCGCCGCTGCACCTGAGCCACCCAAAGCTGTAAAGCGAGAGGGCAATCTCAAGGGAACAACATCAAGTTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTCAGGAAAAAGGCGTACGTTCAGCAACTAGAGTCGAGTAGGATTAAGCTTAATCAGATAGAACAAGAGTTACAACGTGCTAGAGCTCAAGGCATATTAATGGGTGGTGGAAATGCACTTCTGGGAGGGGAGCAAGGCTTTCCTATGGCAATGAGTGGCATTAGCTCAGAGGCTGCAATATTTGACGTGGAATATGCGAGATGGTTAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGTACTCCAAGAACACCTTCACGAAAACGAGCTTCGTTTATATGTGGACAATTGCTTGGCTCACTATGACCAAGTAATGAACCTGAAGAGCATGGTGGCCAAAACCGACGTATTCCACCTTGTTTTTGGCGTGTGGAAGACCCCAGCCGAACGTTGCTTTATGTGGATTGGTGGCTTCAGGCCATCTGAACTCATCAAGATAATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGATGCTCTTAATCAATCTCTCTCAGAGACTATAACATCAGACTCTCTGTGGTGTCCTCCAAATATGACTAACTACATGGGACAAATGGCTGTGGCAATCAACAAACTCTCCACCCTTGAAAGCTTTGTGAGACAGGCTGATAATCTGAGGCACCAGACAATTCACCGTCTCCACCAACTTCTAACAACACGCCAAGCCGCGAGGTGTTTGGTGGCAATTTCTGAGTACTTCCATCGTCTCAGAGCCCTGAGTTCTCTGTGGTCAACTCGTCCTCGCCAAGATCAGTAG 1440 0.4667 MASSSVKGNTNSTTTQIEPLPPPLHLHHQPPQHHFHHHQIPDQQISFGMLPSSSSASIPGNFLSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQKRMRPPPTLNIFPSQPMHAVPPSNSKVNMGLPSTQTSTGSKRQPETSMAKPKPHTEAAAAPEPPKAVKREGNLKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQIEQELQRARAQGILMGGGNALLGGEQGFPMAMSGISSEAAIFDVEYARWLEEHHRIVCELRAVLQEHLHENELRLYVDNCLAHYDQVMNLKSMVAKTDVFHLVFGVWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLWCPPNMTNYMGQMAVAINKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWSTRPRQDQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1510 479 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Gso2g1510 479 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Gso2g1510 479 MobiDBLite consensus disorder prediction 112 140 - -
Gso2g1510 479 Coils Coil 205 232 - -
Gso2g1510 479 MobiDBLite consensus disorder prediction 90 189 - -
Gso2g1510 479 CDD bZIP_HBP1b-like 186 238 - -
Gso2g1510 479 PANTHER TRANSCRIPTION FACTOR TGA9 76 477 - -
Gso2g1510 479 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 76 477 - -
Gso2g1510 479 ProSiteProfiles DOG1 domain profile. 260 474 IPR025422 GO:0006351|GO:0043565
Gso2g1510 479 MobiDBLite consensus disorder prediction 1 19 - -
Gso2g1510 479 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
Gso2g1510 479 MobiDBLite consensus disorder prediction 167 181 - -
Gso2g1510 479 SMART brlzneu 182 235 IPR004827 GO:0003700|GO:0006355
Gso2g1510 479 Pfam Seed dormancy control 278 351 IPR025422 GO:0006351|GO:0043565
Gso2g1510 479 Gene3D - 185 235 - -
Gso2g1510 479 Pfam bZIP transcription factor 186 217 IPR004827 GO:0003700|GO:0006355
Gso2g1510 479 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1510 Gso-Chr2 30792262 30800523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1510 60 478 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.613 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g1510 DOG1 5.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1510 K14431 - gmx:100776311 887.1