Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1470 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGCGGCGATATGCACGCATGAGCAAGGGCGACAATCTCGATGACGTGTCCACCGTCGGCGACGCGCTCGTGTGGGGGAAGGACCTCGAGAAGCATTCGTGCGGTGAATTCTCCTACGCGGTCGTTCAGGCCAACGAGGTCATCGAGGATCACAGCCAGGTCGAGACCGGCTCCGACGCCGTCTTCGTCGGCGTCTACGACGGACACGGAGGCGCCGAAGCCTCGCGCTTCATCAACGATCACCTCTTCCTTAATCTCATGAGGGTTGCTCAAGAAAATGGTTCTATCTCTGAAGATATTATCAGAAATGCTGTTTCTGCTACTGAGGATGGGTTTCTGACTCTTGTTCGCAGGAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTCTGGTTGGTGTTATTTGGAAAGGGACGCTATACATTGCGAATCTTGGAGACTCTCGCGCTGTAATTGGTTCTGTAGGTAGATCTAACAAGATCATTGCTGAGCAGTTGACCAAAGAGCACAACGCTAGCAAAGAGGAGGTTAGACGAGAACTCAAGTCTTTGCATCCAGAAGATTCACAAATTGTAGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATTATCCAGGTATCCAGATCTATAGGAGATGCATATTTGAAACGGCCAGAGTTCTCATTTGATCCGTCATTCCCTCGTTTCCACCTGCCTGAACCTATCCGCCGGCCTGTGCTAACTGCAGAACCATCTATATGTTCAAGAGTTTTAAGACCTAATGATAAGTTCATTATCTTTGCATCTGATGGACTTTGGGAACACTTGACAAACCAGGAAGCTGTTGAGATTGTTCATACCAATCCACGAACCGGGATTGCAAGAAGACTTCTTAGGGCGGCTTTAAATGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCATGATGATATCACAGTGGTTGTTGTCTACATTGACCACGACTTGCGCTGCAAGAATGTTACAGTTCCTGAGTTGTCCATCAAAGGGTTTATTGACACAGTTGGACCTTCCAATTTTAGAAATTTGCGGGGATTGGAATGA 1158 0.4758 MFSWLARIVSACLRPVRRYARMSKGDNLDDVSTVGDALVWGKDLEKHSCGEFSYAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGAEASRFINDHLFLNLMRVAQENGSISEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSVGRSNKIIAEQLTKEHNASKEEVRRELKSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSICSRVLRPNDKFIIFASDGLWEHLTNQEAVEIVHTNPRTGIARRLLRAALNEAARKREMRYKDLQKIGKGIRRFFHDDITVVVVYIDHDLRCKNVTVPELSIKGFIDTVGPSNFRNLRGLE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1470 385 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 370 - -
Gso2g1470 385 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Gso2g1470 385 Pfam Protein phosphatase 2C 69 319 IPR001932 -
Gso2g1470 385 SMART PP2C_4 45 348 IPR001932 -
Gso2g1470 385 CDD PP2Cc 52 350 IPR001932 -
Gso2g1470 385 PANTHER ALPHABET, ISOFORM E-RELATED 6 370 - -
Gso2g1470 385 Gene3D - 38 358 IPR036457 -
Gso2g1470 385 ProSiteProfiles PPM-type phosphatase domain profile. 48 350 IPR001932 -
Gso2g1470 385 SUPERFAMILY PP2C-like 56 351 IPR036457 -
Gso2g1470 385 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1470 Gso-Chr2 29138451 29143907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1470 1 378 PP2C-type Phosphatase Gene Family AT5G06750 69.072 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1470 K01102 - gmx:100813740 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1470 2 29138451 29143907 Gso10g0807 10 11838475 11839290 GST
Gso19g1228 19 40773946 40777815 Gso2g1470 2 29138451 29143907 PCT
Gso2g1470 2 29138451 29143907 Gso19g1228 19 40773946 40777815 PCT