Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1465 ATGAAAGCCTCATTCAATTCAACTTTTGTTTTCAATATTCATCCAATAACCTCTCCTAGTGGTGAGGGATTTGCTTTCATACTAGCATCTAACACTTCTCTTCCAAGCAGCAGTGCAGGCCAATGGCTTGGTAATGTCAACTCAACAAGCATACGGGTAAGCAACATAGTTGTAGTGGAGTTTGATACAAGGAAAAACTATGATGAAGACATTGATGACAACCATGCGGGGTTGGATGTAAAGAGCATCTATTCCATCCAGCAACAACCTCTTGGACCACATAGTGTTAATCTTTCTAGTGGCATTGACGTTGTTGCTACTGTTTACTTTGATGCTAAAGATGGGAAAATGAGCATTTTTGTTTCTACATCAGATTTGAGGTTGAAAAAACCATTGCTTGTAGTGGATCTTGATCTCTCTAAACTGCTTCCAAAAGATGTTTTTGTGGGATTTTCAGCTTCCACAGGGGAACAAGGGGTGGAGGAAGATCTCAACATAGAGCTTGAAATTAAAAGCTCATATAATGCTCCTCATAAGTTTCGGCTGAAGGAACTTGTATCTGCCACAAGGAATTTCCACTCATCAAACAAACTAGGGAAAGAAGGATTTTGCATGGTTTACAAAAGCACATTGAATGGTAAAGATGTTGCTGCGAAGAGGATTTTGAGGAACTCACGTCATAGTAAGCAAGATTTTATGGTAGAAATCACAACCATATGGAATCTCAATCACAAAAATCTAGTGAAGTTAATAAGGTGGTGCTATGAAAAGGGTGAGATCATCCTTGTGTATGAGTTAATGCAAAATGGTAGCTTGTACAAATTCATTTTTTCAACATTTGGAGGGGATTCAATTTTGAGTTGGGAAATGAGGCTCAATGTTATATGTGGAGTTTCTACAGGACTGGATTATCTTCACAATGGATGTGACAAAAGAGTGCTACATAGAGACATAAAACCAAGCAATGTGATGCTGGATTCGGACTTCAATGCTCAGCTTGGAGACTTTGGCTTGGCTCGCACAGTTCATCTCAGCAAAAAAACTCACCACTCAACAAGAGAAATTGTTGGAACACCAGGGTACATGGCGCTGGAAAGCTTCTACACCCGAAGGGCTTTGGTTGAAACCGATGTCTATGCATTTGGTGTTCTGATGTTGGAAGTTGTGTGCAGCGGCAGAAGAAAGCCTGAATACAAACTGGACCTAAGATGTTGCAACGACATTGTGGACTGGGTTTGGGAGCATCATTTCAAGGAAAACATAACTGGTGTCGTGGATTTGAGACTAAATGGTGATTTTGATGAGGCTTAA 1311 0.402 MKASFNSTFVFNIHPITSPSGEGFAFILASNTSLPSSSAGQWLGNVNSTSIRVSNIVVVEFDTRKNYDEDIDDNHAGLDVKSIYSIQQQPLGPHSVNLSSGIDVVATVYFDAKDGKMSIFVSTSDLRLKKPLLVVDLDLSKLLPKDVFVGFSASTGEQGVEEDLNIELEIKSSYNAPHKFRLKELVSATRNFHSSNKLGKEGFCMVYKSTLNGKDVAAKRILRNSRHSKQDFMVEITTIWNLNHKNLVKLIRWCYEKGEIILVYELMQNGSLYKFIFSTFGGDSILSWEMRLNVICGVSTGLDYLHNGCDKRVLHRDIKPSNVMLDSDFNAQLGDFGLARTVHLSKKTHHSTREIVGTPGYMALESFYTRRALVETDVYAFGVLMLEVVCSGRRKPEYKLDLRCCNDIVDWVWEHHFKENITGVVDLRLNGDFDEA* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1465 436 CDD lectin_legume_LecRK_Arcelin_ConA 3 157 IPR001220 GO:0030246
Gso2g1465 436 Gene3D Transferase(Phosphotransferase) domain 1 267 436 - -
Gso2g1465 436 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 156 IPR013320 -
Gso2g1465 436 SUPERFAMILY Protein kinase-like (PK-like) 173 430 IPR011009 -
Gso2g1465 436 Pfam Legume lectin domain 3 162 IPR001220 GO:0030246
Gso2g1465 436 ProSiteProfiles Protein kinase domain profile. 192 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1465 436 SMART serkin_6 192 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1465 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Gso2g1465 436 PANTHER - 164 434 - -
Gso2g1465 436 PANTHER - 3 157 - -
Gso2g1465 436 Gene3D - 1 181 - -
Gso2g1465 436 Pfam Protein kinase domain 192 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1465 436 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 3 157 - -
Gso2g1465 436 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 164 434 - -
Gso2g1465 436 Gene3D Phosphorylase Kinase; domain 1 182 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1465 Gso-Chr2 28928449 28929921 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1465 21 435 Receptor kinase-like Gene Family AT5G10530 33.060 8.87e-64 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso2g1465 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1465 - - gsj:114374599 853.588