Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1462 ATGCACCTCCCTTGGTTAGTCAAATATCAATTAGCATCAACCATCTTCATTATCATTACCCTTACCAAAGTTACCTGCTTTTATTTCAATTTCCCTACCTTCCAAAAAGACAATGAATCTGAGTTATTGCTGAGCAAGAATTCACAAATATACTTCGATGCCATCCAAGTGACCCCAGATATTCGTGGTCCTATACAAGATTATTCTGGACGCGCTTTCTACAAAAAGCCATACAAACTTTGGAATAAAAAGAAGAACCAAATTGCTTCCTTCAACACCACTTTTGTGCTCAACATCAAGCCTGAAACAACCCCTGGCGGAGAAGGCTTGGCTTTTATCTTAACTTCAGATACCACTCTCCCACAAAACAGTTCAGGAGAGTGGCTTGGTATTGTAAATGCTACTTCCAATGGAACCTCACAAGCTGGAATTCTAGCAGTGGAGTTTGACACAAGAAAGAGTTTCTCACAAGATGGCCCTGACAACCATGTTGGCGTCAACATAAACAGCATCAACTCCATCCAACAGGTTCCACTAATCAACACAGGGGTCAATGTTTCATCAGGTATAAATGTAACATTCAAAATTCAGTACTTGAATGACACAATAACGGTTTTTGGTTCGATGACTGGTTTCGAAGAATCTATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTCCATGAAGTGGTTTACCTTGGTTTCTCAGCCTCAACAAGTAACTACACGGAGCTGAACTGTGTGAGATCATGGGAATTCAGTGGTGTTGACATTGCAGATGATGATAATAAAAGTCTCTTGTGGGTTTACATCACTGTTCCAATAGTGATAGTTATTGTTATCATAGGAGGGATGGTGATCTTTTTATTGTGTTGGCAAAGGAAGCGCCATATGGAGAGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAGTATTCCTCTATGGCTCCAAAGAAGTTTAAGCTAAGGGAAATAACAAAAGCAACCGGTGGATTCAGCCCTCAAAACAAGCTTGGAGAGGGTGGGTTTGGAACTGTGTATAAGGGCCTATTGGAAAACAAGGAGGTGGCTGTGAAGAGAGTCTCCAAGAACTCACGCCAAGGGAAGCAAGAATTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCACAGGAATTTGGTGAAACTCACTGGCTGGTGCTATGAGAAAAGAGAGCTTCTCCTTGTGTATGAGTTCATGCCAAAGGGAAGCCTAGACAAGTACCTCTTTGGTGACAAAAATTTTGGTAATAACACCCTTGAAGAGGGGTATTCTTTAACACTGAATTGGGAAACAAGGCACAGTGTGATTCATGGTGTGGCTCAAGCATTAGACTATCTCCACAATGGGTGTGAAAAGAGGGTGCTTCATAGAGACATCAAGGCCAGCAACATAATGTTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGCTTGGCCAGAACCATTCAGCAGAGAAATGAAACACACCACTCTACAAAGGAGATTGCAGGCACACCAGGGTACATGGCTCCAGAGACCTTTCTCACAGGAAGAGCAACAGTGGAAACAGATGTGTATGCATTTGGGGTTCTTGTTTTGGAGGTTGTGTGTGGAAGGAGGCCAGGGAGTGTGTACGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGACTTATATGGGAAGGGGAAAGTAGTTGGTGCTGTGGATGCAAAGTTGAAGAAGGAGGAGATTAAGGAGGAAGAAGTGGAGTGTGTTCTTGTTCTGGGCTTGGCATGTTGCCATCCAAACCCACACCATAGACCATCCATGAGAACTGTTCTTCAGGTTCTGAATGGGGAAGCAACCCCACCTGAGGTGCCTAAGGAAAGACCAGTTTTCATGTGGCCTGCTATGCCTCCATCTTTCAAAGAAGCTGAAGATTCTTCCCTCGTCCAGGGAACACTCGCCCCGTTCACTGAAATCACTGGCAGATGA 2007 0.4375 MHLPWLVKYQLASTIFIIITLTKVTCFYFNFPTFQKDNESELLLSKNSQIYFDAIQVTPDIRGPIQDYSGRAFYKKPYKLWNKKKNQIASFNTTFVLNIKPETTPGGEGLAFILTSDTTLPQNSSGEWLGIVNATSNGTSQAGILAVEFDTRKSFSQDGPDNHVGVNINSINSIQQVPLINTGVNVSSGINVTFKIQYLNDTITVFGSMTGFEESMETLLVSPPLNLSSYLHEVVYLGFSASTSNYTELNCVRSWEFSGVDIADDDNKSLLWVYITVPIVIVIVIIGGMVIFLLCWQRKRHMERPEDAYPRIEDQIQYSSMAPKKFKLREITKATGGFSPQNKLGEGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYEKRELLLVYEFMPKGSLDKYLFGDKNFGNNTLEEGYSLTLNWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGRRPGSVYAQDDYKNSIVYWVWDLYGKGKVVGAVDAKLKKEEIKEEEVECVLVLGLACCHPNPHHRPSMRTVLQVLNGEATPPEVPKERPVFMWPAMPPSFKEAEDSSLVQGTLAPFTEITGR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1462 668 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 652 - -
Gso2g1462 668 ProSiteProfiles Protein kinase domain profile. 338 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1462 668 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Gso2g1462 668 CDD lectin_legume_LecRK_Arcelin_ConA 27 258 IPR001220 GO:0030246
Gso2g1462 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Gso2g1462 668 Pfam Protein kinase domain 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1462 668 Gene3D - 26 270 - -
Gso2g1462 668 Gene3D Transferase(Phosphotransferase) domain 1 413 641 - -
Gso2g1462 668 SMART serkin_6 338 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1462 668 Pfam Legume lectin domain 29 269 IPR001220 GO:0030246
Gso2g1462 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 274 IPR013320 -
Gso2g1462 668 SUPERFAMILY Protein kinase-like (PK-like) 319 621 IPR011009 -
Gso2g1462 668 PANTHER - 5 652 - -
Gso2g1462 668 CDD STKc_IRAK 344 623 - -
Gso2g1462 668 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1462 Gso-Chr2 28854709 28857146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1462 69 636 Receptor kinase-like Gene Family AT5G10530 40.034 2.06e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso2g1462 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1462 - - gmx:100785031 1305.81