Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1453 ATGGCAGTAAAAGGAAGCTTAAGATTCGTGTACGCTCATTTTCCGATCAAAGCTAGCATTGGCAACAACAACAAGTCCATCAAGATCAGAAATTTCCTCGGCGAGAAGAAGGTTCAATGGCGGGGACGTCACTTGCTTTGCAGGAATAATTGGGAACTTGATTGTATATCTGATAACGTGGCTAATGGAAGCTTCTCTCTATTTCCCATTGTTGCAGCAATAATTGCTGACTCTTTCTTTGGCTCCTTCCTTGTTGCCTTGGTTTCTTATTGTGTTTCTTTCTTGAGACATGTAGGTGCCCGATCATATTTTGAAAAAAGGGAAGCTTCACTTGTATGGAGTTACAGACATGCAGGTATTGATTTGTGTTTTAGGGAGACTATTATTTGTTTTGCTTGCTTGAGTTTGGAAGATTGCAAGCGAGGGACATGCTGTAGCATCTCTGGACAGGTCCAATTTCCAATGCTACTCAATTGA 477 0.413 MAVKGSLRFVYAHFPIKASIGNNNKSIKIRNFLGEKKVQWRGRHLLCRNNWELDCISDNVANGSFSLFPIVAAIIADSFFGSFLVALVSYCVSFLRHVGARSYFEKREASLVWSYRHAGIDLCFRETIICFACLSLEDCKRGTCCSISGQVQFPMLLN* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1453 158 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 6 125 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Gso2g1453 158 PANTHER 60S RIBOSOMAL PROTEIN L9-LIKE 6 125 - -
Gso2g1453 158 Gene3D - 4 46 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1453 Gso-Chr2 28247448 28250017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1453 7 39 Cytoplasmic Ribosomal Protein Gene Family AT4G10450 81.818 1.40e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1453 K02940 - gsj:114392018 328.561