Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1450 ATGGACAAGACAACGTCAACAACAACCTCCGAGAGAGAAACCCACGACTTCATGAACGTCGACTCGTTCTCCCAACTCCCTTTCATCCGCCCGGCTCCTCTCCTCAAAGAGAAGCCAGCCATTCGCCTCTTTGGCATCGAATTCGCCGGCGAAAACAACAACAATAACAACACCTCTGTTGTTGTCGCTTCGGCCGATGACTCTGAATCTGTCGAAACAACAACCAACAACAATAACAACAACAACCTCAACTCATTCGACCTCGACCCCACCAACAAGGATGACACCGCCACCGCCACCAATAGCACGAACGGCGAGAGTAGCCGCCGCTTCGAGTGCCACTACTGCTGCCGCAACTTCCCCACCTCCCAAGCCCTCGGCGGCCACCAGAACGCCCACAAACGCGAACGCCAGCACGCCAAACGCGCGCACCTCCAGTCCACGATGGTGCAGGGCAGCACCTTCTCCGACGCGCACCACGTCTACAACCTCATGAACTACCGCTACGGTTCCACTCCACCACCACCACCACCAACAATGCCTTATCCAACATGGAACAACAACAACAACACCACGCGCTTCTACGGAACAACAACGACTTCGTTTTCTCACCACCACCACCACCAACACCAACAACCTATTAACGGAAGCCCCTTAGCGTTTTGGAGAATCCCTAATGGCTCCACCAATAATAACAACCCTAGTTTCAGCCACGAGCATTCGTCGTTGCCGCCTTTGTTCGCGACCGAGGAAATAGCGAACGTGAGAACCTCGCAGGTTGTCGGAGCCTCGGGGCCAACGCAAAATCGCTACGTGTATGACTCGAAACGCGACCGTACTGGGGAAACTGTTTCACACGTGTGGGATTATGGAAAGGGTAAGAGACAGTTGTGTGCGCATGAACAATTTGTCGAGACACACGTGTGCCGAAATCCATCATATTGTCCAGGCAGGTGGGGTGATGAGAGAGAAAGAAAGTGA 981 0.5362 MDKTTSTTTSERETHDFMNVDSFSQLPFIRPAPLLKEKPAIRLFGIEFAGENNNNNNTSVVVASADDSESVETTTNNNNNNNLNSFDLDPTNKDDTATATNSTNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVQGSTFSDAHHVYNLMNYRYGSTPPPPPPTMPYPTWNNNNNTTRFYGTTTTSFSHHHHHQHQQPINGSPLAFWRIPNGSTNNNNPSFSHEHSSLPPLFATEEIANVRTSQVVGASGPTQNRYVYDSKRDRTGETVSHVWDYGKGKRQLCAHEQFVETHVCRNPSYCPGRWGDERERK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1450 326 PANTHER ZINC FINGER PROTEIN GIS 1 251 - -
Gso2g1450 326 PANTHER ZINC FINGER PROTEIN GIS 1 251 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Gso2g1450 326 SUPERFAMILY beta-beta-alpha zinc fingers 108 139 IPR036236 -
Gso2g1450 326 MobiDBLite consensus disorder prediction 64 107 - -
Gso2g1450 326 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Gso2g1450 326 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1450 Gso-Chr2 27994749 27996868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1450 8 231 C2H2 Transcription Factor Family AT2G41940 39.431 4.11e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1450 - - gmx:102668495 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1250 19 41033411 41034620 Gso2g1450 2 27994749 27996868 PCT
Gso3g1248 3 38159891 38161188 Gso2g1450 2 27994749 27996868 PCT
Gso2g1450 2 27994749 27996868 Gso19g1250 19 41033411 41034620 PCT
Gso2g1450 2 27994749 27996868 Gso3g1248 3 38159891 38161188 PCT