Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1410 ATGGCCGAGTCACAAGGTGGTAGTGGCGGTGACGACGGCGCTTCTGGAAGCAGGCGTAGAGGCTCTACTTCCAGGCGTGCCATGGCAGCACAAACACAAGATGAAGCAATGGTGGAATCTTCACCCACAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAGGTGCGTTGAGGGGTGCATCTTTGCACCCCACTTTGGTACTGACCAGGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGTGAACCGCCGCAATGAAGCATCGACAACAATATCATATGAGGCGCAGGCAAGGTTGTCTGATCCAGTTTATGGTTGTGTCTCCACCATCCTTGCTCTGCAACAGCAGGTGGCAACTTTGCAAGCAGAGCTAGCTATGTTGCAAACTCAGCTCATGAATAGTAGGTTTGCCTATGCAAGTGCATTTCAGACCACACAACTACAACAACCAAATATGAATACAGGAGCATTGCAACCAGCATATTCCAACAATTCATGTGCTTCCACCAACCTTCTAAACTTGAGCACCTTCAACAATAACCCTAGCTTTGTCCTTGAAATGGACACAGCACCCTCCTCAAGTTTGGAGCCTCTTCAACTCACGAGGTTGTCCCAATGTAAGGAAGAGGATGAAGAAGAAAACAAGACTCAGAAAGCCTTTAACCACCGTTAA 717 0.4881 MAESQGGSGGDDGASGSRRRGSTSRRAMAAQTQDEAMVESSPTTPCGACKFLRRRCVEGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPVNRRNEASTTISYEAQARLSDPVYGCVSTILALQQQVATLQAELAMLQTQLMNSRFAYASAFQTTQLQQPNMNTGALQPAYSNNSCASTNLLNLSTFNNNPSFVLEMDTAPSSSLEPLQLTRLSQCKEEDEEENKTQKAFNHR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1410 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 232 - -
Gso2g1410 238 ProSiteProfiles LOB domain profile. 44 146 IPR004883 -
Gso2g1410 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 16 232 - -
Gso2g1410 238 MobiDBLite consensus disorder prediction 219 238 - -
Gso2g1410 238 MobiDBLite consensus disorder prediction 20 39 - -
Gso2g1410 238 MobiDBLite consensus disorder prediction 1 39 - -
Gso2g1410 238 Coils Coil 125 145 - -
Gso2g1410 238 Pfam Lateral organ boundaries (LOB) domain 45 143 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1410 Gso-Chr2 26755084 26757922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1410 44 229 AS2 family AT3G03760 61.421 2.33e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso2g1410 LOB 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1410 - - gmx:100808548 429.098