Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1398 ATGGCGAAGGGTGAAGACGCTTTGATTCGAAAGAAGAATAAAAAGCTTCGAAAGAAGAACAGCAGCGGCTCTTCCTCTGTCTCCGCCAAGGTTGCCGCCGTTATCGCCGCCAAGAAGCGCCGCAAGGCCGGTAAACGCCGCATGTGCCAGGGGATGTGCTTTAGTCTACCTACTCTGGATGATCCCTTCAATGATCGAGGTGGGAAAGAGGAAACCAAAACAAAGGGTCCTAAAAAGAAATCCCATTCAAAACCAAAAGACAAGATGGATCATCTTAATGGGAAGAGTGCAGATGGAAAGAAAGGCGCAGTTGGTGGGAGGAAAATTGCAAGGGAATTGAATGATTTACAAAGGGAAAATGAGTCTGTCACAGCCAGCAATAATCTTACTCATAAATGTATCATTAACTCAGAAAGGAAAAATATTGATATGACTGAGATGGCTCATCTTTGCGGTACCAAACAGCGTGATTGTGACATTTCAGAGTTCCCTTCTAAGTTTATTTTTTGGTGTTTGAGTTCCATTGAAAATGCATTGCGACATGGTGATGCCTACACTGATGGAGAGGGTAACTCTTTCTTTTTGAATCCATGGGGATTAGAATTTTTGAAGTGTTATTCTACAGGGAAAGATCTGATAGAAACCAGTGGAACCTCTGCTACTGCTGAGCAAATTGCATGGATGGTTTCTGGTGCAGCTGATACTTTTGTCAGAAAAGAGAAAGAAGGGTTGTCCTTTCCCGGGCCTTTTCTTTTATTCCTTGTACCCTCCCAAGAAAAATCTACCCAGGTTCGAACAGTTTGCAAGCCTTTAAAATCTGTTGGAATACATACAGTGAGTATTCATCCAGGTGCTTCCTTAGATCATCAGATTCAAGGTCTGAAAACTTGTGAGCCTGAGTTTCTTGTTTCTACTCCTGAGAGGCTATTGGAGCTTGTTTCTACGAAGGCAATTGATATTTCTGGGGTATCCATGCTGGTTATTGATGGGCTTAATACTATCTGTAGTGCTGGCCACGCTGATACAGTAAAATCCATCAAGAATTGTATTTCTGGCAATCCCCGTGTTGTGATTTTCAATGATTGTGTCAGCCACATGTCGATCCCAATGGTTCGATATCTTCTGACAGGATCAATTTGTAGAGTCTCTCTCAATAATTCAATTAACAGCCTAAGTTCGTACATTATCCAATCTGTTGAAGTGTGTACGTCAGAAGAAGATAAAGTTGTTATGAGCATCGAAGCCCTGGATCAATTTCAGAGCAACAGTACACAGAATTCAAACATGCTATATATTTTAAGCAAAGATGTCAAGTGCCATAAATTGGTCAAGACTCTCAAATCCAAGGGTTATTCCGTTTCACTTGATTCTGATGCAGCAAATATTAATGATAGGGTGGATTCAGACCGCAGAGCAGCGGTTTCTTTGATTGATTTGGTGCAAATCTCTACTACGGATATAGGGACGTATGATGTGGTAGTCCTACCTAGTTTTGTACCCTCAATTGACACTTACGTGCATATTTTGACAAAGATGGCTCGCACAAGTGTCAATGGTGTATTGCACAGTTTCTTAACAAAAAGAGATACAGAACTTGCTGCACCGTTGATTGCGGTTCTTGAACAATGCGGTCAGGAAGTGCCTCAGACCCTTCAGGATCTGAATCATACATCGAACATGTTGGAAGATTGA 1692 0.4178 MAKGEDALIRKKNKKLRKKNSSGSSSVSAKVAAVIAAKKRRKAGKRRMCQGMCFSLPTLDDPFNDRGGKEETKTKGPKKKSHSKPKDKMDHLNGKSADGKKGAVGGRKIARELNDLQRENESVTASNNLTHKCIINSERKNIDMTEMAHLCGTKQRDCDISEFPSKFIFWCLSSIENALRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLIETSGTSATAEQIAWMVSGAADTFVRKEKEGLSFPGPFLLFLVPSQEKSTQVRTVCKPLKSVGIHTVSIHPGASLDHQIQGLKTCEPEFLVSTPERLLELVSTKAIDISGVSMLVIDGLNTICSAGHADTVKSIKNCISGNPRVVIFNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSYIIQSVEVCTSEEDKVVMSIEALDQFQSNSTQNSNMLYILSKDVKCHKLVKTLKSKGYSVSLDSDAANINDRVDSDRRAAVSLIDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKRDTELAAPLIAVLEQCGQEVPQTLQDLNHTSNMLED* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1398 563 Gene3D - 240 386 IPR027417 -
Gso2g1398 563 Gene3D - 480 559 IPR027417 -
Gso2g1398 563 MobiDBLite consensus disorder prediction 1 106 - -
Gso2g1398 563 MobiDBLite consensus disorder prediction 63 77 - -
Gso2g1398 563 MobiDBLite consensus disorder prediction 86 106 - -
Gso2g1398 563 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 562 - -
Gso2g1398 563 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 562 - -
Gso2g1398 563 Pfam DEAD/DEAH box helicase 246 350 IPR011545 GO:0003676|GO:0005524
Gso2g1398 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 359 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1398 252 554 Eukaryotic Initiation Factors Gene Family AT1G72730 19.614 5.01e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1398 - - gmx:100809099 997.653