Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1387 ATGGCATCTTCAAAACCGCATGGTGTAGAAAACGTTGGAAGTTGTTTGAGAAACACCAAAGGCTTCACCCTCCAAGTCCTTACCGGTTGTTGGTTCATGGAGTTCTCCTCATTCATGATCATGTCAGTGTCAGGAGCAAGCTACATGTTTAGTCTTTACTCAAGGGATATCAAGTCAGTTTTGGGGTATGACCAATCCACCCTCAATTTCTTAAGCTTCTTCAAAGACTTGGGGTCCAACATAGGCATCATTTCAGGCCTAATCAACGAGGTAACACCCCCTTGGGTGGTCCTAACAATTGGTGGGGTTCTCAATTTTTTTGGGTATTTCATAATTTGGCTTGCAGTGGCCAGAAAAATTGCTAAGCCCCAAGTTTGGAACATGTGCTTGTACATCTTCATTGGAGCCAATTCTCACTGTTCCACCAACACTGGAGTCATTGTCACCAGTGTAAAGAACTTCCCTGGCACAAGGGGCATTGTAATTGGCCTCTTGAGTGGGTATCTTGGCTTGAGTGCAGCTATCATCACTCAGATATACTATGCCTTCTATGGAAATGATTCCAAGTTTCTAATTTTGCTCATGGCATGGCTACCAACTGCTGTAACTTTCGTTTTCTTACCAGTTATCAGGCACCACAGGGGAGTTCAACAGCCAAATGATTCCAAGGCTTTCTATAATTTCCTCTACACCACTCTTGTCCTTGCAGGGTTCCTCATGGTGGTGATCATATTGCAAAAACGTTTCACCTTTACAAAGAGTGAGTATTATATCACTACTAGTCTTATGCTTCTCTTGCTCATCCTGCCACTTGCTGTTGTTATGGTTGAAGAAAAAAAGATATGGAAGAGGAAACAAGAACATATCAACAGTGAAAACCCTCTTAAGGCTTTGAATATAACCACAGAGATGCCAAATCTGGAGAAGTCTACACAGGCTCCACAAAAGCAAGCTTCCTGTTGGAAAAGCATGTTCAGGCCACCAAGTAGAGGTGATGATTACACAATACTTCAAGCCCTTTTCAGCCTTGACATGGTGATTCTTTTCTTAGCCACAATTTGTGGACTTGGTGGTACCCTCACTGTGTCAAATAACTTAAGCCAGATTGGCACATCTTTAGGGTATTCGGCACATAGTATAACCACATTTGTGTCCCTTATGGCCATTTGGATCTATATGGGTAAGATTGTACAGGGAGTGGTCTCAGAAATTATCATAGCAAAATTCAAAGTCCCTAGGCCTATGATATTCACATTAATTCTTGTATTACCTTGTGCTGGTTACCTTCTAATTGCTTTCGATGTCCCAAATGGTCTCTATGCGGCCTCAATTATAATTGGGTTCTGCTTTGGGGCTAACTGGCCACTACTATTTACCATCATATCTGAACTTTTTGGTCTTAAATTTTACTCAACTTTGTACAATGTTGGGTCAGTGGCAAGTCCAATTGGGTCATACCTTTTCAGTGTAAGGCTTGCAGGGTATTTGTATGACAAGGAAGCCACTAGGCAAATGGCAGCATTAGGACTAAAGAGGAGGCCTGGGGAGGAGTTGAATTGCAATGGGAGTGAGTGTTACAAAATGGCTTTCATTATAATCACTGCAGTTAGCTTGTTTGGGGCACTTGTGTCTCTCATCCTGGTGTTAAGGACTAGAGAGTTCTATAAAGGTGATATATACAAGAAGTTCAGAGAGGAAGCTAGAACTGCTGAAGCTGAATTTTGTCCAACTCAGAACAAGAATGGACAAACTGCTGCATATGAAGGCTAG 1770 0.4209 MASSKPHGVENVGSCLRNTKGFTLQVLTGCWFMEFSSFMIMSVSGASYMFSLYSRDIKSVLGYDQSTLNFLSFFKDLGSNIGIISGLINEVTPPWVVLTIGGVLNFFGYFIIWLAVARKIAKPQVWNMCLYIFIGANSHCSTNTGVIVTSVKNFPGTRGIVIGLLSGYLGLSAAIITQIYYAFYGNDSKFLILLMAWLPTAVTFVFLPVIRHHRGVQQPNDSKAFYNFLYTTLVLAGFLMVVIILQKRFTFTKSEYYITTSLMLLLLILPLAVVMVEEKKIWKRKQEHINSENPLKALNITTEMPNLEKSTQAPQKQASCWKSMFRPPSRGDDYTILQALFSLDMVILFLATICGLGGTLTVSNNLSQIGTSLGYSAHSITTFVSLMAIWIYMGKIVQGVVSEIIIAKFKVPRPMIFTLILVLPCAGYLLIAFDVPNGLYAASIIIGFCFGANWPLLFTIISELFGLKFYSTLYNVGSVASPIGSYLFSVRLAGYLYDKEATRQMAALGLKRRPGEELNCNGSECYKMAFIIITAVSLFGALVSLILVLRTREFYKGDIYKKFREEARTAEAEFCPTQNKNGQTAAYEG* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1387 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 586 - -
Gso2g1387 589 CDD MFS_Mch1p_like 31 541 - -
Gso2g1387 589 PANTHER MFS TRANSPORTER 3 586 - -
Gso2g1387 589 Pfam Major Facilitator Superfamily 348 552 IPR011701 GO:0022857|GO:0055085
Gso2g1387 589 Pfam Nodulin-like 31 274 IPR010658 -
Gso2g1387 589 SUPERFAMILY MFS general substrate transporter 37 553 IPR036259 -
Gso2g1387 589 Gene3D MFS general substrate transporter like domains 342 556 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1387 Gso-Chr2 24790147 24792457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1387 1 566 Nodulin-like Gene Family AT2G39210 59.862 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1387 - - gmx:100789645 1132.86