Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1373 ATGGGAATCTGCCATGGGAAACCCATTGAAACCCAACAAAGTCAAAGAGAGACCAACAACCCATCAGAATTCCCAAGTGACCACCCAACTCCCACAAAACCCCCCAAAGCCTCATCAAAATTCCCATTCTACAGCCCAAGCCCTCTCCCCAATTGGTTCAAAAACTCCCCATCCTCAAACTCGAACCCTAGCAGTGTCAGCTCAACACCCTTAAGGATCTTCAAGCGCCCCTTCCCTCCGCCCTCGCCGGCCAAGCACATTCGGGCGCTGCTCGCCCGGCGCCACGGCTCCGTCAAGCCCAACGAAGCCGCCATACCGGAGGGGAGCGAGTGCGAGGTCGGTCTTGACAAGAGCTTTGGGTTTGCTAAGCAGTTTTCGGCTCATTATGAGCTCAGTGACGAAGTCGGCCGGGGGCATTTTGGGTACACCTGCTCTGCCAAGGGCAAGAAGGGGGCGTTCAAGGGCGTGGATGTTGCCGTCAAAGTCATTCCTAAAGCCAAGATGACCACGGCAATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGGGCTTTAACAGGACATAAAAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGCCAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGGGAATTGCTAGATAGGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAGAGTAGTTATGATCCAAATATTGAGTGTGGTAGCATTTTGTCATCTGCAAGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTTTTCACTTCTAAGGATGACAATTCCTCGTTGAAGGCCATTGATTTTGGATTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGAAGTGCTTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACTGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCTGTACTGAAGGCAGATCCTAGTTTTGATGAGGCTCCTTGGCCTTCTTTATCAGTTGATGCTAAAGATTTTGTAAAGAGGTTGTTGAATAAGGATTACCGTAAAAGATTGACTGCAGCTCAGGCACTAAGTCATCCATGGCTGGTGAATCATCATGATGATATGAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGCTCGTCTTCCTTACGCAAATCTGCTTTACGGGCTCTTGCAAAGACATTAACAGTAGCTCAGCTAACATATCTCAGAGATCAATATACTCTGTTAGGGCCAAACAAAAGTGGATTAATTTCTATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCCACAGATGCCTCAAAGGATTCACGGGTCTTAGAATATGTCAGTATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAGTTTTGTGCTGCTGCTATAAGTGTGCACCAACTTGAGGGAATGGAGACCTGGGAGCAACATGCAAGGCGTGCCTATGAGCTTTTTGAAAAGGAAGGAAATAGACCAATTATGATTGAGGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCAGTACCTGTTCATGTAGTACTTCAAGACTGGATAAGACAATCAGACGGGAAGCTTAGTTTCTTGGGGTTTGTTAGGCTTCTGCATGGGGTTTCTGCCCGTGCATTTCAGAAGGCCTGA 1752 0.4572 MGICHGKPIETQQSQRETNNPSEFPSDHPTPTKPPKASSKFPFYSPSPLPNWFKNSPSSNSNPSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEAAIPEGSECEVGLDKSFGFAKQFSAHYELSDEVGRGHFGYTCSAKGKKGAFKGVDVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDANVYIVMELCKGGELLDRILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDDNSSLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSVDAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDMRIPLDMIIHKLVKAYICSSSLRKSALRALAKTLTVAQLTYLRDQYTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLEYVSMVSSIQYRKLDFEEFCAAAISVHQLEGMETWEQHARRAYELFEKEGNRPIMIEELASELGLSPSVPVHVVLQDWIRQSDGKLSFLGFVRLLHGVSARAFQKA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1373 583 Gene3D Phosphorylase Kinase; domain 1 122 218 - -
Gso2g1373 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 578 - -
Gso2g1373 583 MobiDBLite consensus disorder prediction 8 26 - -
Gso2g1373 583 PANTHER CDPK-RELATED KINASE 1 29 578 - -
Gso2g1373 583 ProSiteProfiles Protein kinase domain profile. 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1373 583 Gene3D - 417 571 - -
Gso2g1373 583 SMART serkin_6 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1373 583 SUPERFAMILY Protein kinase-like (PK-like) 122 426 IPR011009 -
Gso2g1373 583 Pfam Protein kinase domain 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1373 583 ProSitePatterns Protein kinases ATP-binding region signature. 135 161 IPR017441 GO:0005524
Gso2g1373 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Gso2g1373 583 MobiDBLite consensus disorder prediction 49 71 - -
Gso2g1373 583 Gene3D - 412 501 - -
Gso2g1373 583 SUPERFAMILY EF-hand 420 574 IPR011992 -
Gso2g1373 583 MobiDBLite consensus disorder prediction 1 79 - -
Gso2g1373 583 Gene3D Transferase(Phosphotransferase) domain 1 219 409 - -
Gso2g1373 583 CDD STKc_CAMK 128 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1373 Gso-Chr2 22163108 22171418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1373 1 581 EF-hand Containing Proteins AT3G50530 67.089 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso2g1373 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1373 - - gmx:100783262 1127.08