Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1366 ATGGTTTCGAAAGATTTGTTGCGGGTGCTTTTATTCTTGCACGTTGTGGCTTCTTCGGTCTTGTTCCGCGGGACGCAGTGCCAGCAAATAAGTGATGATTTTGATAACCCTGTGGTTCTGCCTCGTGTCACCCAGCTCGTTTATGCCCAAATCTCCAACATGACCTCTCTGCTCAATAACGAAATCAAAAGCCACTCCACCTTCTGCGTCAGTGATCCGGATGCTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGGCTTTGTGTCTTCTTGCATTCTGAAGACTAAAGGAGATATTACACAACGCTTGTGTACAGCGGCAGAAATAAAGTTTTACTTAAATAGCTTATTGAAGAGGTCTAGTAGTGCCAACTATTTAAAGCCTAACAAGAACTGCAATTTAAACTCATGGGTATCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTCCCAAGCGCCAGGAAGTTGACCTTCGAAATTCACAGGAGATACCTGCCAGAACTACAGACTGTCAAGCATGTTGTGAGGGGTTCTTCTGTCCTCATGGCATCACATGCATGATACCTTGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAACGCAACTGGTGTTTGCGAACCATATCTTTATCAACTGCCTCCATTGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCTGATGTTAGTAGCAGTAGTGAGATGTTTTGTTCAGCAGGATCGTATTGCTCCACAATTACCAAGAGAATTCCTTGCAGTAGTGGGCATTACTGCAGGATGGGTTCTACATCTGAGCAAAGATGCTTCAGGTTGAGTTCATGTGATTCAAACACTGTGACCCAAAATATGCATGCATACGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATCTACAGCTGTTCTGACCAAGTTCTCACTACTAGAGAAAGGAGAATGGCCAAGTCCAGAGAAGCAGCAGCCAGAAGTGTAAGGAAGACTGCAAATGCACGCCAAAGATGGAAAGATGCAAAAGATGCTACTAAGAAGGGTGCAAGTGGACTGCAAGCTCAACTATCGCAAACATTTTCTCGAAAAAAGGACTTCGTAGACCCTGAAGAAATTAAAATTTTGAATCAACCAACTACTGAAACAGATATTGAATTGTTTTCACATTCACATCCTATTACCTCAAATATGGTTGGTAGTTCATCAGCTTGGCCAAAGGAAAAGGGAAAAGAACCCAATGATCTGATGCAGATGATACATGAAACAAAAAATGATCCAAATATTAGGAACAACATTCGTGTAGAAATAGAAACTAGAGATAAAAATGTTACAGCAAGAGTGCCTAAAGAAAAGCAACTGCATACACATAGCCAAATTTTTAAGTATGCATATGCTCAACTTGAGAAAGAGAAGGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTAATTAGTATGGCTACCAGAAGTGAACAAAGGAAAAGGCCTTTAATTGAAATATCTTTCAAAGATCTAACTCTCACTTTGAAAGCATACAATAAACATATATTGAGATCTGTTACTGGGAAAATTAAACCTGGCCGCATCACTGCTGTCATGGGTCCATCAGGTGCGGGCAAGACAACTTTTCTTTCAGCAATAGCTGGGAAGGCATTTGGATGCAAGGTGACTGGTTCCATTTTTATAAATGGAAAGAATGAATCAATCCACTCCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTGACGGTGGAAGAAAATTTCCGGTTCAGTGCACTGTGCAGGCTATCTGCTGACTTGCCAAAACCAGACAAAGTTCTGATTGTTGAAAGAGTTATTGAATTCTTAGGGCTTCAATCTGTACGGAATCATTTGGTTGGAACTGTAGAAAAGCGAGGGATATCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTCATGATCTTGGATGAACCCACGTCTGGGTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGACGTGAAGCTCTTGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGGTTCAGATGTTTGATGACTTGATACTCCTGGCAAAAGGTGGTCTTACTGTATATCATGGATCAGTCAAGAAAGTCGAAAAATACTTTGCAGACCTTGGGATAAATATTCCAAAGCGCATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGAAGTACCTAGTGGAAGTTCAGGAGTCAGTTATAAAGAGCTGCCAGTTAGATGGATGCTTCATAATGGATACCCTGTGCCTCTTGATATGCAGCAGAATGCAGCACAATTTGATATGTATGCAACTGTAAACCCAGCTAAAGAAACAGATCCCGATAGCTCTGGCCATGAAGAAAGAAGCTTTGTTGGAGAATTATGGGATGATGTGAGAAATGGTATGGAACTAAAGAGGGAGAAAATAAGACTCAACTTTTTAAAATCAAAGGATTTCTCTGACCGCAAAACTCCTGGTATATTCAAGCAATACAAATACTTCCTTATACGGGTTGGTAAACAGCGATTACGAGAGGCTAAGATCCAAGCTATAGATTATTTAATATTATTACTTGCTGGAGCCTGCTTAGGAGCACTTACTAAAGCAAGTGATCAGACCTTTGGTGCAGCTGGATACACCTATACGGTGATTGCTGTATCTCTTCTATGCAAAATAGCTGCCTTGAGATCTTTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCATACTTTCTCTCTAAAGACACAATTGATCATTTCAATACAGTGATCAAACCTGTTGTTTACCTCTCAATGTTCTATTTCTTTACCTATCCAAGATCGACTTTTGCAGATAATTACATTGTGCTGCTTTGTCTTGTATATTGTGTGACCGGCGTAGCATATGCATTCGCAATACTCTTTGAACCTGGCGCAGCCCAGCTGTGGTCAGTACTTCTTCCAGTTGTTTTCACACTCATTGCAACACAAACAAAAGATAGTAAATTTTTGAAGGATATAGCTTATTTGTGCTACTCTAGGTGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCATGGGGTGTGGCTCTTAACTCGTTGTGGTTCACTACTGAAAAGTGGCTATAATCTTAATGATTGGGGTTTGTGTATATCTATCCTTATTCTCATGGGTGTAATTGCTCGGGCAGTAGCATTTATCTCTATGCTCACATTTCTAAAGAAGTAA 3342 0.4084 MVSKDLLRVLLFLHVVASSVLFRGTQCQQISDDFDNPVVLPRVTQLVYAQISNMTSLLNNEIKSHSTFCVSDPDADWNKAFNFSSDLGFVSSCILKTKGDITQRLCTAAEIKFYLNSLLKRSSSANYLKPNKNCNLNSWVSGCEPGWACSVPKRQEVDLRNSQEIPARTTDCQACCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYLYQLPPLQPNHTCGGANIWADVSSSSEMFCSAGSYCSTITKRIPCSSGHYCRMGSTSEQRCFRLSSCDSNTVTQNMHAYGIMLIAALSTLLLIIYSCSDQVLTTRERRMAKSREAAARSVRKTANARQRWKDAKDATKKGASGLQAQLSQTFSRKKDFVDPEEIKILNQPTTETDIELFSHSHPITSNMVGSSSAWPKEKGKEPNDLMQMIHETKNDPNIRNNIRVEIETRDKNVTARVPKEKQLHTHSQIFKYAYAQLEKEKAQQQENKNLTFSGVISMATRSEQRKRPLIEISFKDLTLTLKAYNKHILRSVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLSADLPKPDKVLIVERVIEFLGLQSVRNHLVGTVEKRGISGGQRKRVNVGLEMVMEPSLMILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALVQMFDDLILLAKGGLTVYHGSVKKVEKYFADLGINIPKRINPPDYFIDILEGIEVPSGSSGVSYKELPVRWMLHNGYPVPLDMQQNAAQFDMYATVNPAKETDPDSSGHEERSFVGELWDDVRNGMELKREKIRLNFLKSKDFSDRKTPGIFKQYKYFLIRVGKQRLREAKIQAIDYLILLLAGACLGALTKASDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGVAYAFAILFEPGAAQLWSVLLPVVFTLIATQTKDSKFLKDIAYLCYSRWALEAFIIANAERYHGVWLLTRCGSLLKSGYNLNDWGLCISILILMGVIARAVAFISMLTFLKK* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1366 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 728 IPR027417 -
Gso2g1366 1113 MobiDBLite consensus disorder prediction 326 350 - -
Gso2g1366 1113 Pfam ABC-2 type transporter 704 1113 IPR043926 GO:0140359
Gso2g1366 1113 Gene3D - 492 746 IPR027417 -
Gso2g1366 1113 Pfam ABC transporter 523 675 IPR003439 GO:0005524
Gso2g1366 1113 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 506 748 IPR003439 GO:0005524
Gso2g1366 1113 ProSitePatterns ABC transporters family signature. 647 661 IPR017871 GO:0005524
Gso2g1366 1113 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 33 1110 - -
Gso2g1366 1113 SMART AAA_5 532 724 IPR003593 -
Gso2g1366 1113 MobiDBLite consensus disorder prediction 326 357 - -
Gso2g1366 1113 CDD ABCG_EPDR 504 730 - -
Gso2g1366 1113 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1366 Gso-Chr2 21987347 22011585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1366 522 736 Calmodulin-binding Proteins AT2G36910 26.496 1.41e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1366 - - gmx:100783798 2179.44