Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1359 ATGAGAGAAGAGGACTCAAATTGGTTCTCAAGTTGGGAAGAGGAGCTCCCTCCCCCAGAGGAACTCATGCCTCTATCGCAAACCCTAATAAGCCATAACCTTGCAATAGCCTTTGACATAACAAACCCCTCACAGCAACAACAACAACAACAATATTCACAACAAGGACAAGAACAAGAACAACAACAACAATTTCCTCATCAAGTACCGGACAACATCGACGAGGAACCCGCACGCACCCTGAAGCGGCCACGCCTGGTGTGGACCCCACAGCTACACAAGCGCTTCGTGGACGCCGTGGCCCACTTGGGGATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCGAGTCACCTGCAGAAGTACCGCCTCTACTTGAAGCGCATGCAGGGTTTGTCGGCCGGTGGCGGAGTTGGTAGGGTCGCCTCCGCCGACCCCACCACCGACCGCCTCTTCGCCAGCTCGCCCGTGCCGCCGCATTTCCTGCAGCGGCCGGGCTCCGACCACTTCTTGCCACTTGTGTCAGTGCCGGCGTTGCAGCAGCAGCAGCAGCGCCACCACCACCAGCACTTGGCAGTGGCAGCTTCCGCGGCAGCTGGCCACCGCCAATTTGGCTTGCCGCCGAATGGGCACTTTGAGCTTCCCATTTTATCGAGGATGGGGGCTCCGGTGCCGGGTTATGCGGCCGAGGATGTGGAATCCGGAGGGAGGAAGGTTCTTACTTTGTTTCCTGCTGGAGATGAATGA 783 0.5785 MREEDSNWFSSWEEELPPPEELMPLSQTLISHNLAIAFDITNPSQQQQQQQYSQQGQEQEQQQQFPHQVPDNIDEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGVGRVASADPTTDRLFASSPVPPHFLQRPGSDHFLPLVSVPALQQQQQRHHHQHLAVAASAAAGHRQFGLPPNGHFELPILSRMGAPVPGYAAEDVESGGRKVLTLFPAGDE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1359 260 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 84 136 IPR006447 GO:0003677
Gso2g1359 260 MobiDBLite consensus disorder prediction 43 82 - -
Gso2g1359 260 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g1359 260 Gene3D - 80 142 - -
Gso2g1359 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 139 IPR017930 -
Gso2g1359 260 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 260 IPR044841 GO:0003700|GO:0006355
Gso2g1359 260 SUPERFAMILY Homeodomain-like 80 140 IPR009057 -
Gso2g1359 260 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 260 - -
Gso2g1359 260 MobiDBLite consensus disorder prediction 43 69 - -
Gso2g1359 260 Pfam Myb-like DNA-binding domain 87 135 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1359 Gso-Chr2 21793345 21795549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1359 1 260 G2-like Transcription Factor Family AT3G10760 50.000 2.66e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso2g1359 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1359 - - gmx:100816747 446.047