Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1356 ATGGGAATAGAGATTCTGGAGCCTAACACGTGCATTAGGGGTTGCTGCACCAGCCCCTCTATTCCCCTTCATCTCCCTCCCTCTTCTTATACCCTTCTCTCTCCTATTGCCCGAGGGTCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCACGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTAATAAGTTTCATAAAGAATTGCAATTGTTGTGCAAGTTAGATCATCCAGGAATAGCAACACCGATTGCGGCCCATGCAAAACCGCCCAATTACATGTTTTTCTTCAAGTTATTTGAATCTCCAAATCTAGCACAAAAGTTACATGTGGAAGAGTGGATCCCAACTCTGAACGATGCACTTATGATAGCAATGCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTTGACAAAAACCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGAGAGTTTCTACTGAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAAGAGTTACATACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTAACTGGTGTTGTGCCATACACTGATCTTCGTACAGAAGCGCAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAATTAACAGCAGCTGTCGTTTCTGATGGATTACGGCCTGTCCTTGCTGCCGAGGACTTGGGTATACCGTCAAGATTATTATCAATGATTAAAAAATGCTGGGATGCAGATCCTAATAACAGACCTGCTTTTGATGACATTGTTGAGGAACTTGATTTAGTTATGGAGCATGGTAAGTTAAAGAAGGCAGAAGATATTCATATCAGACCTTATAACTTGCATGTTGTTCAACCTGCGGGCAAGACTGATCACTTTAAGGCTTATCAAGAGAGTTTTAGCTGGTTCACTCGTGGCGAACTTTTGGCCAGGAGTGCCTCTAGTGCAAATGATTCTGGTTTGATAACTAGGTGCGAGTCTTCTGACAAGCCTTCAGCATACCACCCAACAATGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTTCCCCATATTTGTGATGAAAAGGATGCCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGCCTTTTCTTCTAGAGCTGTACCAGCAGTTTTGCAGACTTCAGATTTCATGGGCAGTCCTGCTAATGCACTAGCGGAAGCATTCATTAAGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTGCTATTCTTATAGTCAGAAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGTAATCTTATGTCGTGCTGGTAATCCAATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGGCAGGGGGGCCAAGTACATTGGCAAGTTGATACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACTCGTTCTATTGGTGATGATGATTTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGAGTACCTTGTGCCCAGAGGATGAATTTCTGGTCATGGCTAGCGATGGCCTGTGGGATGCCATAAGCAGTATGGAGGTCATAAATATAATAAAAGATACTGTTAAAGAGCCTGGAATGTGCTCCAAGAGGTTAGCTACTGAAGCAGTGGAACGAGGCAGCAAAGATAATATCACAGTTATCGTTGTTTTCTTACGTCCTGTGTCTACAGCAGAGAGAATTTATTAG 1977 0.4294 MGIEILEPNTCIRGCCTSPSIPLHLPPSSYTLLSPIARGSESVVYEGTLDGTRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIATPIAAHAKPPNYMFFFKLFESPNLAQKLHVEEWIPTLNDALMIAMQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKNDLKRVSTENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGISINELLTGVVPYTDLRTEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAEDLGIPSRLLSMIKKCWDADPNNRPAFDDIVEELDLVMEHGKLKKAEDIHIRPYNLHVVQPAGKTDHFKAYQESFSWFTRGELLARSASSANDSGLITRCESSDKPSAYHPTMSWGSYATCGRRETMEDTHFILPHICDEKDAYAFGIFDGHRGAAAAAFSSRAVPAVLQTSDFMGSPANALAEAFIKTDAAFRKELDSYRKSNRCIQKDWHPGCTAIAILIVRNKLFVANIGDCRVILCRAGNPIALSKDHVASCLQERERVIRQGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITESTLCPEDEFLVMASDGLWDAISSMEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1356 658 Gene3D Transferase(Phosphotransferase) domain 1 22 334 - -
Gso2g1356 658 SUPERFAMILY Protein kinase-like (PK-like) 18 316 IPR011009 -
Gso2g1356 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Gso2g1356 658 Pfam Protein phosphatase 2C 395 641 IPR001932 -
Gso2g1356 658 SUPERFAMILY PP2C-like 385 650 IPR036457 -
Gso2g1356 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Gso2g1356 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1356 658 Gene3D - 382 653 IPR036457 -
Gso2g1356 658 Pfam Protein kinase domain 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1356 658 SMART PP2C_4 381 646 IPR001932 -
Gso2g1356 658 SMART PP2C_SIG_2 406 648 IPR001932 -
Gso2g1356 658 PANTHER - 1 658 - -
Gso2g1356 658 PANTHER PROTEIN PHOSPHATASE 2C 1 658 IPR015655 GO:0004722|GO:0006470
Gso2g1356 658 ProSiteProfiles Protein kinase domain profile. 30 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1356 658 CDD PP2Cc 390 648 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1356 Gso-Chr2 21317820 21342712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1356 99 658 PP2C-type Phosphatase Gene Family AT2G40860 62.963 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Gso2g1356 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1356 - - gmx:100785390 1321.99