Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1332 ATGAAGAACTCTGCTTCGGAAAGCGGTTTGTACATAATTGAGAGCGATGAAGATGTTGAGAAGGATCTGCAGAAAGACGAAAACGATGGAAACGAATCCGATTATTCGAATGATTCCAATGAAAACCAGTCAATGAGGAAACCCAGCAATTACAGCATCGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGCAGTGTACCATCCCCAAATATTGGGTTTCTGGGCACCACATCACTGTCAAGATTAGGCAGTTCTTTTATTTCTTCATCTTTGACAAGAAGGCACACTCTTGAAGTGTTACAACCAGAAAAAAAACCACTCTTGAAACCCACAGAAGAGGAGCAACCGCGACATACCTTGCTTCCTCCCCAGATATCTAGGAAGTCTTCCATTAGAATTTCCAAGGTTTCTCATGAACCTCACATTCCTGGCCAATGCACTTTTGGGCAAGCTGTGCTTAATGGTATAAATGCCCTTTGTGGTATAGGAATCCTTTCAACCCCTTACGCAGCCAAAGAGGGTGGATGGGTTGGTCTTTCTATATTGTTATTGTATGCAGTTTTTTCCTTTTATACCGGCTTGCTCTTGCGTTACTGCTTGGATAGTGCACCTGGTCTTGAGACATACCCTGACATCGGCCAAGCAGCTTTTGGTACTACTGGACGTGTCATCATCTCTATAATACTATACATGGAATTATATGCTTGTTGCATTGAGTACATAATTGTGGAGAGCGACAACTTATCTACATTATTTCCAAATGCGCACATTAGTTTGGGTGGAACTCAACTCAATGCTCATATTTTGTTTGCAATATTGACTGCCTTGGCTCTTCTTCCTACTGTTTGGCTACGTGACCTACGCATTCTCAGTTACATCTCAGCTTGCGGAGTTGTTGCAACGATTCTAGTGGTTCTCTGCTTGTTCTGGGTTTGCTTTGTAGACAATGCTGACATTCATACCCAAGGAACAACAACAACATTCAACTTTGCAACTTTTCCTGTTGCAATAGGTCTCTATGGTTACTGCTATGCAGGGCATGCTGTGTTCCCTAACCTCTATACTGCCATGGCAAATCGGAATCAATTCCCTGGAGTGCTCTTAGTATGTTTTGCCATTTGTACAACTATGTATTGTGCAGTAGCTATTATGGGTTACGCAGCATTTGGAGAAGCAACACTCTCTCAGTATACTCTTAACATGCCCCAACACTTGGTGGCCGCCAAGATAGCTGTGTGGACTACGGTGGTTAATCCATTTACCAAATATGCATTGAGTCTATCTCCAGTAGCAATGTGTCTAGAGGAGTTGATACCAACAAACAGTCCCAACTTTTTCATATATTCCAAGCTCATCAGAACAGCTCTAGTAGTTTCTACACTGCTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTGATGTCATTGACTGGATCTTTACTCACAATGTTTGTGTCCTTGATTCTTCCCGCTGCTTGTTTCCTAAGCATAAGGGGTGGCAGAATCACGCGCTTTCAGATTAAACGATGTTATCTCCTCCCTCCTCTTGAAGAACAATGGATGATCTTACCTGAAGGATAA 1590 0.4252 MKNSASESGLYIIESDEDVEKDLQKDENDGNESDYSNDSNENQSMRKPSNYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTRRHTLEVLQPEKKPLLKPTEEEQPRHTLLPPQISRKSSIRISKVSHEPHIPGQCTFGQAVLNGINALCGIGILSTPYAAKEGGWVGLSILLLYAVFSFYTGLLLRYCLDSAPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSTLFPNAHISLGGTQLNAHILFAILTALALLPTVWLRDLRILSYISACGVVATILVVLCLFWVCFVDNADIHTQGTTTTFNFATFPVAIGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVCFAICTTMYCAVAIMGYAAFGEATLSQYTLNMPQHLVAAKIAVWTTVVNPFTKYALSLSPVAMCLEELIPTNSPNFFIYSKLIRTALVVSTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRITRFQIKRCYLLPPLEEQWMILPEG* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1332 529 MobiDBLite consensus disorder prediction 1 48 - -
Gso2g1332 529 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 514 - -
Gso2g1332 529 MobiDBLite consensus disorder prediction 14 32 - -
Gso2g1332 529 PANTHER OS05G0424000 PROTEIN-RELATED 23 514 - -
Gso2g1332 529 Pfam Transmembrane amino acid transporter protein 149 505 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1332 Gso-Chr2 18645333 18659982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1332 1 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.580 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1332 K15015 - gmx:100798108 923.694