Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1295 ATGTGCTGGTCACTCTTTTATCATTATAAATGCCATGAATCTGATGCACAACACAAAGATTCTAAACCTTGTTCAGACCAAAAAAATGCAAGGCATAAGATAATCGTTGGAGTGGGATTTGGAGTTACAGCTCTATGCCTTGTCTTTATAATAGTTGGAATCTTTTGGTGGAAGGGCTACTTCAAACGAATAATTAGGACAATAAAAGGTACTGAAAGACAAGATTCACAGAAGGGGATATTTACGTTAAAACAAATTAGAGATGCCACATATGATTTCACTCCAGATAATATGATTGGAGAAGGTGGTTTTGGTCATGTCTACAAGGGTCAATTATCTGATGGAACATTGATAGCAGTCAAACAACTCTCATCAAAGTCACGGCAGGGAAATCGTGAATTCTTAAATGAGATAGGCATGATATCTTGTTTGCATCACCTTAATCTTGTGAAACTTCATGGATGTTGCATGGAAAGGGATCAATTGATATTGGTGTATGAGTACATGGAAAGTAATAGTTTGGCTCGTGCTTTATTCAGTGAGTTTCTACCCAAAGTGCAAACTATTGTATTTGTCTTTTACCTTGTCATCTAA 594 0.3636 MCWSLFYHYKCHESDAQHKDSKPCSDQKNARHKIIVGVGFGVTALCLVFIIVGIFWWKGYFKRIIRTIKGTERQDSQKGIFTLKQIRDATYDFTPDNMIGEGGFGHVYKGQLSDGTLIAVKQLSSKSRQGNREFLNEIGMISCLHHLNLVKLHGCCMERDQLILVYEYMESNSLARALFSEFLPKVQTIVFVFYLVI* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1295 197 ProSiteProfiles Protein kinase domain profile. 93 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1295 197 SUPERFAMILY Protein kinase-like (PK-like) 74 183 IPR011009 -
Gso2g1295 197 Pfam Protein tyrosine and serine/threonine kinase 96 180 IPR001245 GO:0004672|GO:0006468
Gso2g1295 197 Gene3D Phosphorylase Kinase; domain 1 61 168 - -
Gso2g1295 197 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 182 - -
Gso2g1295 197 ProSitePatterns Protein kinases ATP-binding region signature. 99 121 IPR017441 GO:0005524
Gso2g1295 197 PANTHER BNAC01G36570D PROTEIN 76 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1295 Gso-Chr2 16498007 16500559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1295 20 181 Receptor kinase-like Gene Family AT1G29750 57.576 7.34e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso2g1295 PK_Tyr_Ser-Thr 5.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1295 - - gsj:114390919 410.223