Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1284 ATGGTCGAAACCAGACGCAGCAGCTCCTCCTCTTCCAAGCGCTCTCTCTCTTCGCCCTCTCCCCCCAACAACACCAAACGATCCAAGGTGTCCGAGGATTCCTCATCCACCACCGTGCCTTCGGTTGCTCCGGTCAACGAATCTGGAACCGCTAATGAATCCGCCGAACCGGAGCTGAGACCCTCTGATCTGCCTGATACGGCGTCGTTGAAGGCTGTTGATGGCTGTGATGCGATGTCGCCCGATAGGTCTCCCTCTGCGCCCGTTGAAGGCGAGGCCTTGGTGTCCCCTCAGTGTCAAGGTGACACCGCGGAGAAATTGAAGGGGGTGCCGATGGCGGCGGCGGGTGGTCGGTCGAAGAAACGCCCTTCCAAATTGAGCCCCAAGGTTGCGTGGGGAAAGCTTCTCTCTCAGTGTTCTCAGAATCCTCATGTATCCATGAGTGATCTTATTTTCACTGTTGGTCAAGGTCGTAATTGTAATTTATGGCTTAAAGATCCCACTGTTGGTAATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGCTCGTCTGTTGCATTACTTGAAATCACAGGGGGCAAAGGTTCTATTCAAGTTAATGGCAAGACATATCGAAAGAATGCCCGTCTGATTTTAAGTGGAGGTGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAGCTCACAAATAATAATATTAATCCTGCTGATATACCTTCTTCTGTGAGTATTTTAGAAGCCCAAAGTGCTCCAATAAATGGAACGCAAGTCGAAGCTAGATCTGGTGACCCTTCTGCCGTTGCTGGAGCATCGATATTGGCCTCTTTATCTAATCTTCCTAAAGATTTATCTCTCCTTTCACCTCCTGCTAAAACTGGAAAGAATGTGCAACAGAATGCTGACATTTCATCACTACCTTCTGGCAACGGGGATGATATGCCAGACAGTGAAATGAAGGATGCCACCAATGATGTAGCATCTGAAGTTTTCTCTGCTGATAAAACTGTTAATAAAAATCCTAACCTTGACACAGCTGAAGTCAACATCAATGTGGATCCCGATGTTGGGAAGGTTACTGCTGCTACCTATGAATTGAGGCCATTATTGCGCATGCTTGCTGGGTCATGTCCTGAAGTTGATTTAAGTTGTGGCATTACCAAGATATTGGAGGAGCGAAGGGAATTAAGAGAGCTCCTTAAAGATGTTGATACCCCGACAATATTGGCATCAACCAGGCGACAAGCATTTAAGGACAGTTTACAACAGAGAATTCTCAAATCTGAGAATATTGATGTCTCTTTTGAAACTTTCCCTTATTATCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTACATTTATTCATTTGAAGTGCATTGGCTTTGGAAAATATGCTTCTGACCTCCCATCAGTGTCTCCACGAATATTGTTATCTGGTCCTCCAGGTTCGGAAATATATCAGGAGACTTTGTGCAAGGCACTTGCAAAGCATTTTGGTGCCAGGCTACTGATTGTCGATTCTCTCTCATTGCCTGGTGGAGCATCATCAAAGGAAGTTGATTCTGCCAAAGAAAGTTCCAGACCTGAAAGACCATCATCTGTGTTTGCTAAGAGAAGTTCCCAGACTACCACATTACAACATAAGAAACCAGCTTCTAGTGTTGATGCTGAAATTGTAGGTGGATCCACGTTAAGTTCTCAGGCTATGCTGAAGCAAGAGGTTTCTACTGCATCGTCAAAAGGCACTACTCTTAAAGAGGGTGATCGAGTAAAATTTGTTGGTAACTTTCCTTCTGCTGTCTCATCACTACCAAATTATCCTTCAAGGGGACCAAGCTATGGCTCCCGGGGCAAAGTTCTGCTTGCTTTTGAAGATAATAGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAGGATGATCGTGGGTTCTTTTGTTCTGCAAATCATTTACTACGGGTAGATGGTTCTGGAGGGGATGACGCAGACAAAGTTGCAATTAATGATATCTTTGAGGTTACCTCTAATCAGAGTAAAAGTGGTTCACTAGTTTTGTTCATTAAAGATATAGAGAAGGCAATGGTTGGGAACTATGAAGTTTTGAAAAATAAATTTGAAAGCTTGCCACCAAATGTTGTAGTAATTGGCTCTCATACTCTGCTTGACAATCGGAAGGAGAAGACCCAACCTGGTGGCCTTCTGTTTACCAAGTTTGGGAGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTGGTAGACTGCATGATCGGAGCAAAGAAACCCCTAAAGTAATGAAGCAACTTGGTCGTCTTTTCCCAAACAAAGTGACAATACAGTTGCCTCAGGACGAGGCTTTACTTTCTGATTGGAAGCAACAATTAGAACGTGATATTGAAACTATGAAAGCTCAGTCCAATATTGTCAGTGTTTGCACAGTTCTCAACAGGATTGGATTGGATTGCCCTGACCTTGAGACTCTTTGCATCAACGACCAAACCCTCACAACTGAAAGTGTGGAGAAGATCATTGGCTGGGCTATAAGTTACCATTTTATGCATTCATCTGAAGCTTCTATCAAAGATTCCAAGCTTGTGATATCTGCAAAAAGCATTAATTATGGGCTTAACATTCTACAGGGCATTCAAAATGAGAACAAAAACTTAAAAAAATCACTGAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTTCTTGCTGATGTTATTCCGCCAACCGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTTATGCTTCCTCTTCAGAGGCCTGAGTTGTTTTGCAAAGGACAGCTGACCAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGACGAGGTTGATAGTATGCTTGGGAGACGTGAAAACCCTAGTGAGCATGAGGCTATGCGAAAAATGAAAAATGAGTTTATGGTAAATTGGGATGGTCTGCGTACAAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGACGATTAATGGTTAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTCAGTGTCATTTTGGCGAAAGAAGATTTGGCACCTGACATTGATTTTGAAGCAATAGCTAATATGACAGATGGATATTCTGGGAGTGACTTAAAGAATCTGTGTGTCACAGCAGCTCACTGTCCAATACGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGCTTAGCATTGTCTGAGAACAAACCTTTACCTGGATTGTGTAGCAGCGGTGACATTCGTCCCTTAAAGATGGATGATTTTAGATATGCACATGAGCAGGTGTGTGCAAGTGTGTCATCAGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTCTATGGAGAAGGAGGATCAAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3732 0.4293 MVETRRSSSSSSKRSLSSPSPPNNTKRSKVSEDSSSTTVPSVAPVNESGTANESAEPELRPSDLPDTASLKAVDGCDAMSPDRSPSAPVEGEALVSPQCQGDTAEKLKGVPMAAAGGRSKKRPSKLSPKVAWGKLLSQCSQNPHVSMSDLIFTVGQGRNCNLWLKDPTVGNVLCKLSHIERGGSSVALLEITGGKGSIQVNGKTYRKNARLILSGGDEVVFGSSGKHAYIFQQLTNNNINPADIPSSVSILEAQSAPINGTQVEARSGDPSAVAGASILASLSNLPKDLSLLSPPAKTGKNVQQNADISSLPSGNGDDMPDSEMKDATNDVASEVFSADKTVNKNPNLDTAEVNINVDPDVGKVTAATYELRPLLRMLAGSCPEVDLSCGITKILEERRELRELLKDVDTPTILASTRRQAFKDSLQQRILKSENIDVSFETFPYYLSDTTKNVLIASTFIHLKCIGFGKYASDLPSVSPRILLSGPPGSEIYQETLCKALAKHFGARLLIVDSLSLPGGASSKEVDSAKESSRPERPSSVFAKRSSQTTTLQHKKPASSVDAEIVGGSTLSSQAMLKQEVSTASSKGTTLKEGDRVKFVGNFPSAVSSLPNYPSRGPSYGSRGKVLLAFEDNRSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDADKVAINDIFEVTSNQSKSGSLVLFIKDIEKAMVGNYEVLKNKFESLPPNVVVIGSHTLLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRSKETPKVMKQLGRLFPNKVTIQLPQDEALLSDWKQQLERDIETMKAQSNIVSVCTVLNRIGLDCPDLETLCINDQTLTTESVEKIIGWAISYHFMHSSEASIKDSKLVISAKSINYGLNILQGIQNENKNLKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILSVILAKEDLAPDIDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSENKPLPGLCSSGDIRPLKMDDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1284 1243 MobiDBLite consensus disorder prediction 296 316 - -
Gso2g1284 1243 Gene3D - 1111 1205 - -
Gso2g1284 1243 Coils Coil 1243 1243 - -
Gso2g1284 1243 Gene3D - 937 1217 IPR027417 -
Gso2g1284 1243 Coils Coil 899 919 - -
Gso2g1284 1243 MobiDBLite consensus disorder prediction 520 560 - -
Gso2g1284 1243 MobiDBLite consensus disorder prediction 1 55 - -
Gso2g1284 1243 SUPERFAMILY SMAD/FHA domain 133 229 IPR008984 GO:0005515
Gso2g1284 1243 Gene3D - 131 240 - -
Gso2g1284 1243 MobiDBLite consensus disorder prediction 1 95 - -
Gso2g1284 1243 ProSitePatterns AAA-protein family signature. 1082 1101 IPR003960 GO:0005524|GO:0016887
Gso2g1284 1243 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1243 - -
Gso2g1284 1243 MobiDBLite consensus disorder prediction 539 557 - -
Gso2g1284 1243 MobiDBLite consensus disorder prediction 293 325 - -
Gso2g1284 1243 Pfam ATPase family associated with various cellular activities (AAA) 979 1108 IPR003959 GO:0005524|GO:0016887
Gso2g1284 1243 CDD FHA 157 232 IPR000253 GO:0005515
Gso2g1284 1243 SMART AAA_5 975 1112 IPR003593 -
Gso2g1284 1243 Pfam AAA+ lid domain 1132 1168 IPR041569 -
Gso2g1284 1243 CDD AAA 977 1110 - -
Gso2g1284 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 938 1217 IPR027417 -
Gso2g1284 1243 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1284 Gso-Chr2 15905461 15917462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1284 974 1179 Calmodulin-binding Proteins AT3G56690 36.667 6.27e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1284 - - gmx:100801477 2391.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1284 2 15905461 15917462 Gso2g1284 2 15905461 15917462 ECH