Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1240 ATGATTCCTTGGGGTGGCCTCAGTTGCTGTTTGAGTGCCGCTGCTCTTTACCTTCTCGGCAGAAGCAGTGGCAGGGATGCTGAAATTCTTAAATCCGTTACAAGGGTCAACCAGTTGAAGGAACTAGCTCAACTATTAGATGCAGAAATATTACCCTTGATTGTTACAATTTCTGGAAGAGTTAGCTCTGAAACCCCAATTAACTGCGAGTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACAGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGACTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCTGCTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCGGGTCGCTCACTTGTACGTGGAACTTTGGATTATCTGCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGGCTTTTCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTGTGGGCATATGTGCTGCTGTACAACTTGTTCTTCACACTTGACCAATTGTCCTCTATGCCGGCGACAGATAGAGAAGGTTGTGAAGACTTTCCGTCATTGAGTGTTGAGCATACATGGCATACATGGTAG 738 0.4512 MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLIVTISGRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTDRVHVVGARGAAGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGAFRIQRPHKGPFYVWAYVLLYNLFFTLDQLSSMPATDREGCEDFPSLSVEHTWHTW* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1240 245 Pfam E3 Ubiquitin ligase 85 203 IPR022170 GO:0004842|GO:0006996|GO:0016567
Gso2g1240 245 PANTHER - 1 203 IPR044231 GO:0004842|GO:0016567
Gso2g1240 245 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1240 Gso-Chr2 15403816 15407398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1240 1 221 C3H Transcription Factor Family AT1G63900 78.475 7.47e-126 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1240 K15688 - gmx:100800734 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1240 2 15403816 15407398 Gso2g1240 2 15403816 15407398 ECH