Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1212 ATGCCAAGCACAAGAAATCTGAAGCACCTGAACATGTGTTGTTCAAATTCAGCTACTCCTGAATATGAATCTCCTCCATTGAGCCCCATAACTATTTCCTCAAATCACAATATCACTACTCCTTCTTCAATTATGATAAAGAACTTCAACTCTATCTATGACCACTCTTTCAGTTCCACGACCACCTTCTTTGAACCCGAACCCGAACCCGAACCCGCTGATTTCGCCACCGCCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGTCTCTCCAATTCCCTAGTTGAATACAACAATACCAACAAAAGTACTACTCAACACTTACCACCATTGTTGAGAGAAGATAGTGGTGATGTTGATGAGAAGAAGAAGAAGAAGGTGTTGTTCAAGGGGAGCGTGGCGGTGGCGACGTACTCGCCGGACCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGGCCGGAGCTGATGGACGTGAAGTCCAATTGGAACGTCCTTCACGAGCTTCTTCTATGCTATCTTGCGCTGAATCCAAAGAGCACTCACAAGTTCATTCTTGGAGCCTTCGCTGATCTCCTCGTTAGCCTCATGTCATTCTAG 615 0.4813 MPSTRNLKHLNMCCSNSATPEYESPPLSPITISSNHNITTPSSIMIKNFNSIYDHSFSSTTTFFEPEPEPEPADFATAFASQRFFFSSPGLSNSLVEYNNTNKSTTQHLPPLLREDSGDVDEKKKKKVLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1212 204 ProSiteProfiles OVATE domain profile. 136 200 IPR006458 -
Gso2g1212 204 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 134 202 IPR006458 -
Gso2g1212 204 PANTHER TRANSCRIPTION REPRESSOR OFP12 7 203 - -
Gso2g1212 204 Pfam Transcriptional repressor, ovate 140 201 IPR006458 -
Gso2g1212 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 203 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1212 Gso-Chr2 15123192 15124018 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso2g1212 Ovate 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1212 - - gmx:102660213 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1212 2 15123192 15124018 Gso10g0239 10 2481152 2482202 GST
Gso19g1308 19 41760641 41761832 Gso2g1212 2 15123192 15124018 PCT
Gso3g1309 3 38937099 38938544 Gso2g1212 2 15123192 15124018 PCT
Gso2g1212 2 15123192 15124018 Gso19g1308 19 41760641 41761832 PCT
Gso2g1212 2 15123192 15124018 Gso3g1309 3 38937099 38938544 PCT