Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1195 ATGATTCCGAAAACTCCGTCACGGCACCTGTTACTCGCGCTAGGGTTTCTGCTTTGCGCCACAATCCCCTTCGTTCACGGCGAGTCGTCTACGTGCCTGACTGTCTACAAGAACGGCGGTGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAAGCTCTCCGAGTACGATTCCCCTCCCCAAACCACCGCGCGTTGCCAAACCGCCATGCTCCAAGGCCGCAGAAACTCGCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTCCCCGGTCCGAACGGGATCAAGGAGGTTGCGGTCGGGATTGTGGCAGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCGAAGCTTTTGGTGGAGTATTTCGTTCTGCACACTTATTTTCTTCTCGATGCCGCCTTTTCTGTTATTTCGAAGACGTCGACAGAGACTTTGCTTCACAAGAGAGATCGTGATCATGTAAACCTACTGCATAGATGGAAGGAGATTCTAGGGTTGGAATGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAGTCCATGACATCGATGCAAAGTTTTCTGAGGAAGCCTCTAGAAATAATCTTCACTCAGGATCTACAGCAACCGTTGTTTTGGTAGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCTTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGACTTGTTATTAAAGCTATACAGGCAGAAAGAGCATGATGGTTCTGTTTCCGTGTGGGATCGTGAAAAGTACAGATTGGTTTCCTCCCATGGTCTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCAGACAGAGATGATGAAAGAATTCGGGTGGAAACAGCTGGTGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGATGTACTCTTTAAAAGTTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTTTTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGATGAGCGTGCAGGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTCAGTAACATGAGATCTGAGTGTACCCCTGCATCTTCCTATTCTTTGGCAGATTTAATTGTTAATACTGCCTTCAAAAAGGGCAGTATGGACAATGTGGCAGCAGTTGTCATTCCTCTTGAGTCTGCCAAATCTTCTGCAAACTCGCTTAGGGGAAGCTATAGTGGAAAGAGGGATGCAGATTTTCCATTGTTTGGTCAGCAGGAAACTGCTTCCAAAAGCTCAGTTAATGACATCGGGTCTGATCTTATACACTTGGAGCACCCTCATCTGGTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTAAAAGATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTCGATGAACCAGAGGACTCTAAGCAGATTGCCAAAAAAACTGACTGGGAAGACTATTTGTATGAACTACCTCAGCCTCTACCAGATGCCCTTCATCAACATGCCACTCCTGGTGGTCCTGTAAATTTATACAATAGCCAAAACTTTTGCTTTCACCTTGGTCCAACTATTAGTGAAGCCGAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTCATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCCAGTAATGGGTCTGCTGATTATTCAATGCCCGATTTAAGGTATGTATTGAAGAAGAGTTTTGGACGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGATAGTAATTCTGCAAAAATGAGCAAGGATGACAAAAATACAACCAGCAGCTCAACTGCTTCTGATTGTCAGGATGGTTCTACTAACTACACCCTGTACATTTTGAAGCGTATAATGGTGGAGAGGGGGTCTGCTGTTTACTTAAGTGGGCTGAGGGAGAAGTATTTTGGAGAAATTTTCTTAAATGCCTCTACATGCTTTGAAGATCCTCTATCAGCTGGCAAATCAAACTGTGTCTTAGAAACATCACAGGTTGGTCCTGAGAAATCATTTCCAAACAAATTTCGGCTACAACGAACCACATATGAAGAAGGTTTGAATCATATTGCAAGATATGTGGAGTCTTTTGAGTCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGTTTGTCATTGTCAAAACTTTTATATGCCGTGGAAGATGCGTATGGTACTGCTGAGAAAGAAAGACTTGAGCAAGCTAAACATGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTAAAAACAGCAGAAGAAGGGCAAGCAGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATTCACATTAAAGCATTTATATGGTTCCACTGGGCCTTCTAGAGCTGAACAAACCTATGAGTATACTCCTCCTGAAGCTTTGCTGAATGCTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAAATGTCTTCCAGATAAATGCTTTAACACGTGCTCTTTTAGACAGACAACTAGAAGGTTGGAATGAGGGTGTGAAGGAGCTGGCATACAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGAATTTCCAGGTCCAGCAGTTCCTCAAAAAAGTATCAAAAGGTTGGAGTTTCACCTGCATCTTGGAAATGCTCCGAAGAATTCTTCTCTCGTCAAATTAGGAATCGAGATCCCCTAAAAATAGGTTTTTCAAACATCTGGGCGTTACGGTTAGTGCGCCATCTGTTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTGCAACATCCTTATTTCCAACATCCCCCAAGAGAATGA 3222 0.4295 MIPKTPSRHLLLALGFLLCATIPFVHGESSTCLTVYKNGGAPAVFQSPKCPRWKLSEYDSPPQTTARCQTAMLQGRRNSQEDRALCVLDVRIPFPGPNGIKEVAVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDAAFSVISKTSTETLLHKRDRDHVNLLHRWKEILGLEWHELHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAILCSENFQSPREAKDLLLKLYRQKEHDGSVSVWDREKYRLVSSHGLTHFAVKELTSDHHPDRDDERIRVETAGGQVQNWGGVPRINGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSFLVVASDGVFEKMSVQDVCDLLWEVHRFSNMRSECTPASSYSLADLIVNTAFKKGSMDNVAAVVIPLESAKSSANSLRGSYSGKRDADFPLFGQQETASKSSVNDIGSDLIHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEDSKQIAKKTDWEDYLYELPQPLPDALHQHATPGGPVNLYNSQNFCFHLGPTISEAEDQCINPEGFASFIGLLESIPLHDTGSSNGSADYSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQDSNSAKMSKDDKNTTSSSTASDCQDGSTNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDPLSAGKSNCVLETSQVGPEKSFPNKFRLQRTTYEEGLNHIARYVESFESQANEIWLVFSYEGLSLSKLLYAVEDAYGTAEKERLEQAKHVQILRPSKWWHWLKTAEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPNVFQINALTRALLDRQLEGWNEGVKELAYKLRSFMELCILIPGISRSSSSSKKYQKVGVSPASWKCSEEFFSRQIRNRDPLKIGFSNIWALRLVRHLLHWDPEDRPSIDEALQHPYFQHPPRE* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1195 1073 SMART PP2C_4 59 439 IPR001932 -
Gso2g1195 1073 SMART serkin_6 618 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1195 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Gso2g1195 1073 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Gso2g1195 1073 Gene3D Transferase(Phosphotransferase) domain 1 810 1068 - -
Gso2g1195 1073 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 605 - -
Gso2g1195 1073 CDD PP2Cc 74 441 IPR001932 -
Gso2g1195 1073 SUPERFAMILY Protein kinase-like (PK-like) 617 1069 IPR011009 -
Gso2g1195 1073 SUPERFAMILY PP2C-like 65 442 IPR036457 -
Gso2g1195 1073 Gene3D - 63 449 IPR036457 -
Gso2g1195 1073 Pfam Protein kinase domain 819 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1195 1073 Pfam Protein phosphatase 2C 200 434 IPR001932 -
Gso2g1195 1073 PANTHER ALPHABET, ISOFORM E-RELATED 21 605 - -
Gso2g1195 1073 ProSiteProfiles Protein kinase domain profile. 618 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1195 Gso-Chr2 14917257 14930886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1195 682 1071 PP2C-type Phosphatase Gene Family AT3G63340 64.615 3.48e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Gso2g1195 Pkinase 9.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1195 - - gmx:100781476 2168.27