Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1190 ATGAGTCACCTACCATCAAACTTGTTGCCCGTTGACGGAAGCCCAGAGTGGATGAACAGGGGTGACAACACGTGGCAGCTGACGTCAGCTACTCTGGTGGGCCTGCAAAGCGTTCCGGGCCTGGTCATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCTTTGAACTCTGCCTTCATGGCCCTCTACGCTTTTGCGGCGGTTCTTGTTTGTTGGGTTGGGTGGTGCTACAAAATGTCATTCGGCGAGAGGATCCTTCCATTTCTGGGACAGCCAAACACGGCCTTGGACCGGGAATTCGTTTTTCGCAAAACTTTTGCTGGGGAATTTCCCAACGCCACCATGGTGTACTTTCAGCTGGTTTTTGCTGCCATCACGTTGATTCTCATAGCGGGGGCGTTGCTTGGGAGAATGAACTTTTATGCATGGATGTTGTTTGTTCCATTATGGGTTACGTTCTCTTACACCATTTGTGCCTTCAGTATATGGAGCACCGATGGATGGTTGTTCAAGATGGGCCTCATTGATTATTCTGGTGGCTTTGTTATTCACCTTTCTTCTGGGGTTGCTGGTTTCGTCGCAGCATGTTGGGTAGGACCAAGGGCAGTGAAGGACAGAGAGAGGTTCCCTCCAAACAACATACTTCTGATGCTGGCTGGGGCTGGCTTACTATGGATGGGTTGGTCTGGATTCAACGGTGGAGATCCATACGCAGCCAGCATAGATGCATCTCTGGCCGTGCTTAACACCCACGTGTGCACAGCAATGAGCTTGTTGACTTGGCTTTTCCTTGACATCCTCTTCTTTGGAAAACCTTCCGTCATTGGTGCCACTCAAGGCATGATCACTGGCCTTGTTTGCATCACCCCTGCTGCCGGTGTGGTGCAAGGTTGGGCAGCAATCATAATGGGAATGATGTCCGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAAGTAAGCTCCTCAAACAAGTTGATGATACTCTAGCAGTTTTCCACACCCATGCCGTGGCTGGTAGCCTAGGTGGCATTTTGGCTGGTTTTTTTGCTGACCCTAAGCTTTGTTATCTCTTCTATGGAGTAGAAGATTCCCTACATTATACGGGTCTTGTTTATGGCATATTCAATGGGAGGCCAAATGCAGGGTTCAGGCAAATGATGGTTCAGCTTCTTGGCATTGTGTTTGTGATACTTCTCAATGTCACCACAACTAGCATTGTGTGCTTGTTGGTTAGGATCATAGTTCCACTTAGGCTGAGTGAAGATGACTTGCAAGTTGGGGATGAAGCAGTCCATGGCGAAGTTGCATATGCATTGTGGGGTGATGGAGAGAAGCTTGAGACTGCTACTGAGCCTTTGACATCTGAAAAGAATCTTGAATGGCCAACTGTGGAACTAAGAACTTAA 1416 0.4859 MSHLPSNLLPVDGSPEWMNRGDNTWQLTSATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYKMSFGERILPFLGQPNTALDREFVFRKTFAGEFPNATMVYFQLVFAAITLILIAGALLGRMNFYAWMLFVPLWVTFSYTICAFSIWSTDGWLFKMGLIDYSGGFVIHLSSGVAGFVAACWVGPRAVKDRERFPPNNILLMLAGAGLLWMGWSGFNGGDPYAASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAIIMGMMSGSIPWYTMMVLHKESKLLKQVDDTLAVFHTHAVAGSLGGILAGFFADPKLCYLFYGVEDSLHYTGLVYGIFNGRPNAGFRQMMVQLLGIVFVILLNVTTTSIVCLLVRIIVPLRLSEDDLQVGDEAVHGEVAYALWGDGEKLETATEPLTSEKNLEWPTVELRT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1190 471 Pfam Ammonium Transporter Family 25 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso2g1190 471 Gene3D Ammonium transporter AmtB like domains 11 460 IPR029020 -
Gso2g1190 471 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 4 461 - -
Gso2g1190 471 TIGRFAM amt: ammonium transporter 22 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso2g1190 471 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005887
Gso2g1190 471 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005887
Gso2g1190 471 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005887
Gso2g1190 471 SUPERFAMILY Ammonium transporter 17 422 - -
Gso2g1190 471 PANTHER AMMONIUM TRANSPORTER MEP2 4 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1190 Gso-Chr2 14830395 14833073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1190 113 463 Inorganic Solute Cotransporters AT2G38290 60.114 1.34e-142 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1190 K03320 - gmx:112999382 941.028