Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1188 ATGACGACGGGTATCGTACGCGACCAGAATCTGGAGAAACATATTCACAAGCAGATGGGGTGCATGGCTGGTTTCCTTCAGATCTTCGACCGCCACCAGATGCTCACCGGAAAACGCATCTACTCCCCCAAACGCCTCCCTCCGGCCTCGCCTGAGCCGGAGAATCCCGCAGTCTCACCGGCGCGTTCAACGCCGTCGCCGGCGAGAGAGGTCACGAGTTCGGAGCCCCAGGCGAATGTTCCCACGCTTCCCGTTCTCGAATTCAAGGAAGGCACGCGGTCCTCGTGGAAGTTCTCGAGAGAAGCTCCGAGGTTGTCGCTCGACAGCAGAGCCATCGTGGACGCGAAGGGAACTCTCCACCTTCACCCGCGCGAGATCCCTCCCGAAAACGACGCCGACAAACAGCGTCGTTCCACCAGCGTCATTGCCAAGCTCATGGGCCTCGAGCCCCTACCAGATTCGGAGCCCGGACCTGGGCCCGGGCCCGTGGCGAAGCTCCAGAGATCCGCGTCCGAGTCCAGAGTCCCCAGAGATCCGCCTCTGCCCCTAACAACGCAGTGTCGTTTCTTCGACCCCAACAATTTCTTTTCTGCTCAGTTCACAACCAATGTGGTCTACGAGAATAACAACAACAACAACGCTGCCATCGAATCACGATTCGTTAATAGCAGAGTCGCCGCAGATCCACCGAAACAGAGGTTAAAGAAGAGTTTCTACGACTCCGCGGATTTCTTCCCCGAGCCGAAACACACCGTTTCGGTGTACGGAGAGATTGAGCGGAGGCTGCGGATGCGTGGGATTAACGAGCCTTCCAAGGATCTCCACACTCTGAAACACATCTTAGAAGCATTGCAGCTCAAGGGGCTTTTGCATTCCAACAACAAGCCCAACCAATCTCCCATTGTGGTTATGAAACCGGTTCGATCTGTGAACCGGACCGGGAATGATTATTCTCCCCGGTCCAGTCCTCGCCGGAGCCCCAGAGTTACAAACGAGGCTCGGAGGAGTGAACAAAATGAGCGGAATGTAAGGGGGCAAGGCAGAACACTGAGTTCGAGTCCGAACCGGAGGAAACAAGAACCGCAGAGGAGAGTGGGTGTTGATTCGAGAAGGGTGTCTCCGGTTAATTCGCCCAAGGTGAGTCCAAGGAGGAATGCAAATGCAACGTGTCAGCACGTGCCAAGTGGATCACCAAGAATGATGAGAAAAAATATTGAGCGTAAGGAGAAGGTGCTGTTGGGTGGGGCAGAGGATGAATCGTCCACCGTTTCAGACAACAGCTTCAGCACTTGTTCATATCCCGATACAGAGAGGTACAGGTCGGAAGAGTACATGGAAGGGAAAGATCTGCTGGATAGGTGCGATAAGCTTCTCAACAGCATCGCAGAAATAACAGCGGCCAACGAGTTGCAACCAAGTCCAGTATCGGTTCTTGACTCATCCTTTTACAAGGATGAGTGGGCTTCACCATCCCCGATAACCAAACGCTGCATTGATTACAAAGATCATGCGGCGGAATCAGAAGATGATATGTGGAGTGCAGCATTGTGCAGCAGCGAGGAGGCAGCGTCGGAGGATTGTGATTTCGCTTACGTGTGGGAGATTCTGCGGGCTTGCACTTACTTGCCGGAAGAGAGCGACATTTTCCTGTTACTGGAGAAGCAGCAATGTCTGAAGGGGAAAGACACCTCGAAGGCTTCGACGCTGCAGAGGAGGTTGATTTTCGACACACTCCAGGAGATCTTGAACCGGAACCAGCAATTGCCGCCGTGGAAGGCGGTATCGTGCGGCGAGCAGAGGCAGCAGATCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAAGAAGCGGAGTCGGAGGACTTGTTTAAGGTGATATGCGGAGTGTTGAAGAAGGACATGGCGGATGAGATGCGTGGGTGGGGAGAATGGCCGGTGGAGATGGGAGATGTCGTGTTGGACATCGAACGTCTCGTGTTTAAGGATCTTGTTGGCGAAACCATTCGAGAACTCGCTTCGTTTTCCCCTCAATCTCAATGTAACAACAAGCTACTACTACCCGCGCTTCGTAGGAAACTCGTCTTTTGA 2085 0.54 MTTGIVRDQNLEKHIHKQMGCMAGFLQIFDRHQMLTGKRIYSPKRLPPASPEPENPAVSPARSTPSPAREVTSSEPQANVPTLPVLEFKEGTRSSWKFSREAPRLSLDSRAIVDAKGTLHLHPREIPPENDADKQRRSTSVIAKLMGLEPLPDSEPGPGPGPVAKLQRSASESRVPRDPPLPLTTQCRFFDPNNFFSAQFTTNVVYENNNNNNAAIESRFVNSRVAADPPKQRLKKSFYDSADFFPEPKHTVSVYGEIERRLRMRGINEPSKDLHTLKHILEALQLKGLLHSNNKPNQSPIVVMKPVRSVNRTGNDYSPRSSPRRSPRVTNEARRSEQNERNVRGQGRTLSSSPNRRKQEPQRRVGVDSRRVSPVNSPKVSPRRNANATCQHVPSGSPRMMRKNIERKEKVLLGGAEDESSTVSDNSFSTCSYPDTERYRSEEYMEGKDLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFYKDEWASPSPITKRCIDYKDHAAESEDDMWSAALCSSEEAASEDCDFAYVWEILRACTYLPEESDIFLLLEKQQCLKGKDTSKASTLQRRLIFDTLQEILNRNQQLPPWKAVSCGEQRQQIWSEFRRIREREEAESEDLFKVICGVLKKDMADEMRGWGEWPVEMGDVVLDIERLVFKDLVGETIRELASFSPQSQCNNKLLLPALRRKLVF* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1188 694 MobiDBLite consensus disorder prediction 291 398 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 311 326 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 327 342 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 61 80 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 41 83 - -
Gso2g1188 694 PANTHER LONGIFOLIA PROTEIN 1 694 IPR033334 GO:0051513
Gso2g1188 694 MobiDBLite consensus disorder prediction 118 137 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 148 183 - -
Gso2g1188 694 Pfam Domain of unknown function (DUF4378) 528 665 IPR025486 -
Gso2g1188 694 PANTHER OS11G0587300 PROTEIN 1 694 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 374 394 - -
Gso2g1188 694 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1188 Gso-Chr2 14802241 14805772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1188 96 685 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 38.397 1.35e-101 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1188 - - gmx:100777397 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1188 2 14802241 14805772 Gso10g0264 10 2785179 2788422 GST