Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g1166 | ATGGAAGAGGTTGAGCAAGCTAATAGAGTAGCTGTTGAAAGCTGTCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAGGTTCAGCATAGGAATTTAATGGTGGAAACTGGGGAAGCTGTGGTGAGGTTCAAGAAAGTTGTTTCCTTGCTTCACAGTGGTATGGGTCATGCAAGAGTGAGGAAGGTTAAAAACCCTCAAATCCCCTTTTCCCACCAAAGCATCTTCTTAGACAACCCCAATTGCAAAACCATCAACAACCATCACTTCAAAAATCTGCAGTTTCCCCAAACCAGCTTCCCTGACAATTCAATTCAGGAACTTGGTTCAACCATTAAGAATTCACTCTCTCTTGGACAACCCTCTTTGGAATTGAGCTCCAATGGGAAAAGTCCTCTTCACCTCACACAGCAGGCTTCATCAAATCACTATCACTTCTTTCAGCAGCAGCAACAACAGCAACAGCAAAGGCTGTTGCTGCAGCAGCAGCAACAACAACAACAACAAATGAAGCATCAAGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGACAGTACTAGCTGCACACCAACAATGTCATCCACTAGGTCTTTTATCTCTTCCTTGAGCATAGATGGAAGTGTGGCTAACTTGGATGGAAGTGCCTTCCATTTAATCGGAGCTCCACACTCTTCTGATCAGAATTCCCAGCAGCACAAGAGAAAGTGTTCTGCCAGAGGTGATGAGGGAAGCTTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGGGCAATTAAGGTGCCCGCTATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCGTGGAGGAAGTATGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGCAGCAGCATGAGAGGGTGTCCTGCAAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACCTATGAAGGCGAACATAACCACCCCAAGTTACCAACACAATCTGCAAATGCATGA | 1068 | 0.4513 | MEEVEQANRVAVESCHRVLSLLSQPRDQVQHRNLMVETGEAVVRFKKVVSLLHSGMGHARVRKVKNPQIPFSHQSIFLDNPNCKTINNHHFKNLQFPQTSFPDNSIQELGSTIKNSLSLGQPSLELSSNGKSPLHLTQQASSNHYHFFQQQQQQQQQRLLLQQQQQQQQQMKHQAEMMFRRNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSARCHCSKKRKHRVKRAIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA* | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g1166 | 355 | Pfam | Plant zinc cluster domain | 240 | 285 | IPR018872 | - | |
Gso2g1166 | 355 | Pfam | WRKY DNA -binding domain | 289 | 346 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1166 | 355 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 354 | IPR044810 | GO:0003700 | |
Gso2g1166 | 355 | SUPERFAMILY | WRKY DNA-binding domain | 285 | 347 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1166 | 355 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 2 | 354 | - | - | |
Gso2g1166 | 355 | ProSiteProfiles | WRKY domain profile. | 282 | 348 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1166 | 355 | MobiDBLite | consensus disorder prediction | 229 | 248 | - | - | |
Gso2g1166 | 355 | Gene3D | WRKY domain | 273 | 349 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso2g1166 | 355 | SMART | WRKY_cls | 287 | 347 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g1166 | Gso-Chr2 | 14591753 | 14594617 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g1166 | 1 | 352 | WRKY Transcription Factor Family | AT2G30590 | 58.747 | 2.02e-129 | 374 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso2g1166 | WRKY | 5e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g1166 | - | - | gmx:100170681 | 681.789 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso2g1166 | 2 | 14591753 | 14594617 | Gso2g1166 | 2 | 14591753 | 14594617 | ECH | |
Gso2g1166 | 2 | 14591753 | 14594617 | Gso10g0281 | 10 | 2964915 | 2967700 | GST |