Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1163 ATGACAGACATATTTGAGAAGCACCAATCTTCTGATTCTTCAAATTATGCATCAAGTAGTGGCCTATGTGAGGAAGATAAGGAGATTGGGTATAGAGCTGCAACATCAAAGCACAGATATGTTTTGGCTAACAACTCTGCTCTTAAATTCATACCCATCAAAATTGACCTGAATTGTGCTCGCATGGTGATGGCTGAGGTGGTGGGTACTTTTATTTTGATGTTCTGTGTGTGTGGAATCACTGCAAGCACACGATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTGGTGATTATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTGAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACGTAGGTAGCCTTGTATACGGCATAAAATCAGATGCTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCGTTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGAATGGCAATTGGGCTTGCTGTACTAATCACAGGCCCAGTCTCCGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAATTCAAGAACATATGGATATACATGGTAGCCCCCAGTGGTGGAGCTATAGCAGGAGCTGCAATGTTTCGTTTCCTACGCCTTCGAGACCAACATTCTAGTACTTTGTCCTCCCCAAACATCATTGATGTTGGTCGTTCCATACCCTTTTGCTCAAGTTAA 891 0.4388 MTDIFEKHQSSDSSNYASSSGLCEEDKEIGYRAATSKHRYVLANNSALKFIPIKIDLNCARMVMAEVVGTFILMFCVCGITASTRFQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWLKVPVYIIAQTVGSMSATYVGSLVYGIKSDAMMTMPLQGCNSAFWVEVIATFIIMFLVAALTSESQSVGHLSGFVAGMAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAIAGAAMFRFLRLRDQHSSTLSSPNIIDVGRSIPFCSS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1163 296 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g1163 296 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Gso2g1163 296 SUPERFAMILY Aquaporin-like 57 275 IPR023271 -
Gso2g1163 296 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 PANTHER AQUAPORIN NIP7-1-RELATED 9 293 - -
Gso2g1163 296 PANTHER AQUAPORIN NIP2-1 9 293 IPR034294 -
Gso2g1163 296 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g1163 296 Gene3D Glycerol uptake facilitator protein. 24 280 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1163 Gso-Chr2 14557453 14559785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1163 56 274 Major Intrinsic Protein MIP AT4G10380 42.466 2.56e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1163 K09874 - mtr:MTR_1g070385 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1163 2 14557453 14559785 Gso10g0283 10 3008421 3019710 GST