Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1150 ATGGAAGGAGGAGGAGCTGCTCCGCCGGCCGACACCGTGATGTCCGACGCGGCGCCTCCGCCGCAGCAAGCGATGGCTATGGGGATCGAGAATATTCCGGCGACGCTGAGCCACGGTGGCAGGTTCATCCAATACAACATATTCGGAAACATATTCGAAGTCACCGCCAAATACAAGCCACCCATCATGCCCATCGGAAAAGGCGCATACGGCATCGTTTGCTCGGCTTTGAACTCGGAGACGAATGAGCACGTTGCCATCAAGAAGATTGCGAATGCGTTTGATAACAAGATTGATGCAAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTTGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAGATATTCAATGATGTTTACATTGCATATGAGTTGATGGACACTGACCTTCACCAAATTATTCGTTCAAACCAAGGATTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAAATCCTCCGTGGGTTGAAGTACATACATTCTGCCAATGTTCTGCATAGGGACTTAAAACCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTCACGTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTGAACTCTTCTGATTACACTGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGCAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTTATGGAGCTGATTGGCACCCCATCAGAGGCTGATTTGGGGTTCCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCCCTTTACCGCTGTCAATCTTTCCAGGAAAAGTTTCCACATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGAAAAAGGATTACTGTTGAAGATGCACTGGCGCACCCGTACTTGACATCTCTGCATGACATCAGTGATGAACCAGTGTGCATGACTCCCTTCAACTTTGACTTTGAACAACATGCTTTGACGGAGGAACAGATGAAAGAACTGATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 1176 0.4558 MEGGGAAPPADTVMSDAAPPPQQAMAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREIFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRCQSFQEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFNFDFEQHALTEEQMKELIYREALAFNPEYQQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1150 391 Gene3D Phosphorylase Kinase; domain 1 42 381 - -
Gso2g1150 391 CDD STKc_TEY_MAPK 52 387 - -
Gso2g1150 391 ProSiteProfiles Protein kinase domain profile. 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1150 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Gso2g1150 391 ProSitePatterns MAP kinase signature. 94 197 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso2g1150 391 Pfam Protein kinase domain 64 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1150 391 SMART serkin_6 59 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1150 391 Gene3D Transferase(Phosphotransferase) domain 1 143 371 - -
Gso2g1150 391 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 389 - -
Gso2g1150 391 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Gso2g1150 391 MobiDBLite consensus disorder prediction 1 21 - -
Gso2g1150 391 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 389 - -
Gso2g1150 391 SUPERFAMILY Protein kinase-like (PK-like) 64 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1150 Gso-Chr2 14384112 14389167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1150 1 391 MAP Kinase Gene Family AT2G43790 87.437 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso2g1150 Pkinase 3.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1150 K14512 - gmx:547616 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1750 7 39746994 39752082 Gso2g1150 2 14384112 14389167 GST
Gso2g1150 2 14384112 14389167 Gso11g0257 11 2151522 2154627 PCT