Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1143 ATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGAGTTTTCACACACCACTCCAAGGGGAAGCAGGATTCAGATAATAACAAAGGCACAAAAGAGAAGAAGAAAAGTCTAGGAAAACTAAAGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTCGGGGACTTCGAAAGGGAGCAACAATTACTGGGGTTAAGGCCTGCCACTCCTCCGGAGAGACCTAAAACACCACCTTATGTCCCTCCAAGAGCTCCTTCTCCTAGACCTCCCTCTCCGAGGGCTCCTTCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCGAGGGTGGCTTCTCCACGAGTTACCTCTCCCAAAGCCGCGTCTTCCCGGATTGCTCATCACCACAAGGAGGTTGGCTACAGACCAGAGCCAACTTTGAGGCAACAGCATGCCACAGCTACTAAGATCCAGTCTGTTTACAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTAAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCCGATTTCAAGAATGATAAGGATGCAGCCAGTATCTTGGGCAAACTCACTTCTGAAGCAGGCAATGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGATTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCCACTCCGAAATCAACTCACACCCCGATGACAGATACACGATCCAGTGGATTCCCTTGGTGGTGGAACTGGTTGGAAAGACAAACACCTGCAGCAACTCCACAAGAAAGACAAAGCTTGAAGAATTTTCAAATCACACCTCCAAGACCATACTCAGAGCAAAAGACTAGTCCAAGACCTGGCTCCAGCACTCAAAGGCAGCCGCAGTCGCAGCAGCAGCAGCCTCATGTTTCCTTTGATAATATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTGGCATCTTCAAAACCGGTGCGAATGCCTCCATTTAGAACTCCTCAGGCTAACAGCTCAGGCTCAGGCTCTAAATATCCGAGACCAAGGGATGTAGGGTCCAATTCACCCTTTGATTTGCCATTGAAGGATGATGACAGCCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACCCTTTCAGCCCGGGCCAAAGCACGTGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGAACTCCAACTAGTACTGATTCAAAGAGGAGGCTCTCATTCCCTTTATCACAAGGAATTGGATCATTCAAGTGGTCTAAAGGGTTCTCAAGCAAGGATCAAAGGGTGCCAGACAAATTTCAGTCACTTGAATCTATAGGAAATGTGAGTGTGGATTCAACGGTGTCTTTGCCTGCAAGGGTGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1608 0.4776 MGKKGSWFSAIKRVFTHHSKGKQDSDNNKGTKEKKKSLGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPATPPERPKTPPYVPPRAPSPRPPSPRAPSPRPPSPRAASPRVASPRVTSPKAASSRIAHHHKEVGYRPEPTLRQQHATATKIQSVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQADFKNDKDAASILGKLTSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPMTDTRSSGFPWWWNWLERQTPAATPQERQSLKNFQITPPRPYSEQKTSPRPGSSTQRQPQSQQQQPHVSFDNMDTPTPKSTKSTIVASSKPVRMPPFRTPQANSSGSGSKYPRPRDVGSNSPFDLPLKDDDSLTSCPPFSVPNYMAPTLSARAKARASSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGFSSKDQRVPDKFQSLESIGNVSVDSTVSLPARVVGRKPFTRFV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1143 535 MobiDBLite consensus disorder prediction 320 429 - -
Gso2g1143 535 PANTHER IQ-DOMAIN 13 1 532 - -
Gso2g1143 535 Gene3D - 150 204 - -
Gso2g1143 535 MobiDBLite consensus disorder prediction 80 116 - -
Gso2g1143 535 Pfam IQ calmodulin-binding motif 156 173 IPR000048 GO:0005515
Gso2g1143 535 SMART iq_5 151 173 IPR000048 GO:0005515
Gso2g1143 535 Pfam Protein of unknown function (DUF4005) 412 486 IPR025064 -
Gso2g1143 535 MobiDBLite consensus disorder prediction 448 476 - -
Gso2g1143 535 MobiDBLite consensus disorder prediction 17 42 - -
Gso2g1143 535 MobiDBLite consensus disorder prediction 320 386 - -
Gso2g1143 535 MobiDBLite consensus disorder prediction 1 149 - -
Gso2g1143 535 ProSiteProfiles IQ motif profile. 152 180 IPR000048 GO:0005515
Gso2g1143 535 MobiDBLite consensus disorder prediction 461 476 - -
Gso2g1143 535 PANTHER IQ-DOMAIN 5-RELATED 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1143 Gso-Chr2 14292739 14298960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1143 1 534 IQD Protein Family AT3G59690 51.408 1.57e-164 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1143 - - gmx:100814804 939.488