Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1137 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAACATAAAAGGAGACCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCGATCAGCACTAAGGAGAGGAAGGAAAAGATTGGCGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGGAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGAATACATAGGATTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCATACCTTGAAAGTTCACCAGCAGCCAAGATGCAGGGTGTGGAGCCATGCAGCCTGAGGAGTAGAGGCTTATGTCTTGTTCCTGTGTCAGTTACTATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCCCCCATTAAGACTACTACTTCTCCTAAATTTGAGAAGGATGTCTCCCAATTTCATTGA 504 0.4306 MIASSFCNADSMFSREEGIDVRKMMEHKRRPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGVEPCSLRSRGLCLVPVSVTIGVAESNGADIWAPIKTTTSPKFEKDVSQFH* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1137 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 13 150 - -
Gso2g1137 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 109 IPR036638 GO:0046983
Gso2g1137 167 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Gso2g1137 167 SMART finulus 52 101 IPR011598 GO:0046983
Gso2g1137 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Gso2g1137 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 150 - -
Gso2g1137 167 Gene3D - 43 114 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1137 Gso-Chr2 14225638 14230953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1137 24 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 55.696 9.16e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1137 - - gmx:100527660 329.717