Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1122 ATGAGTGTTGGGCCGGGAATGGATTTGCCGATCATGCATGACAGTGATCGCTATGAGTTTGTGCGTGACATTGGTTCTGGGAATTTCGGTGTGGCCAGGCTTATGAGGGACAAACATACTGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTATATTGACACCAACACATTTGGCAATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGAGAATATGCAATGCAGGGAGGTTCAGTGAGGATGAGGCGCGCTTCTTCTTCCAACAACTTATATCAGGAGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGCGACTTGAAGTTGGAAAACACATTGTTGGATGGTAGTCCTGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCTTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATATATCGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATAGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAGTACTCAATTCCTGACTATGTTCATATATCTTCCGAGTGCCGTCATCTGATATCAAGGATTTTTGTTGCTGATCCTGCAAAGAGAATCTCTATTCCTGAGATCAGAAACCATGAGTGGTTTTTGAAGAACCTTCAAAGTGATCTCATGGATGGGAATACTAACAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAAAGCATAGAAGAAATCATGCAGATAATTAAGGAGGCTACAATTCCTGCAGCTGGATCTCAGTCTCTCAACCATGATCTTACTGGTAGCTTGGATATTGATGATGACATGGATTCGGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATTGTGTATGCTATGTAA 1065 0.416 MSVGPGMDLPIMHDSDRYEFVRDIGSGNFGVARLMRDKHTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISSECRHLISRIFVADPAKRISIPEIRNHEWFLKNLQSDLMDGNTNNNQFEEPDQPMQSIEEIMQIIKEATIPAAGSQSLNHDLTGSLDIDDDMDSDPDLDLDSSGEIVYAM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1122 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso2g1122 354 CDD STKc_SnRK2-3 17 273 - -
Gso2g1122 354 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Gso2g1122 354 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 10 349 - -
Gso2g1122 354 Gene3D Transferase(Phosphotransferase) domain 1 94 282 - -
Gso2g1122 354 Pfam Protein kinase domain 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1122 354 SMART serkin_6 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1122 354 ProSiteProfiles Protein kinase domain profile. 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1122 354 Gene3D Phosphorylase Kinase; domain 1 2 93 - -
Gso2g1122 354 PANTHER SERINE/THREONINE KINASE 10 349 - -
Gso2g1122 354 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1122 Gso-Chr2 14039327 14043420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1122 17 280 CBL-interacting serine-threonine protein kinases AT5G25110 45.091 6.36e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso2g1122 Pkinase 2.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1122 K14498 - gmx:100806771 702.59