Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1092 ATGGATGAATTACAGTGGTTTGGCATTGGAGATTTATTGCGACTTGGTCAGAGACTCAGAGTGATCCGGTTTGGCTTTGGTGCACAAAGCAGTGAAAACCTTGCAATTTCCTTAAATTGTTTTGCTAAAACTGGACCTTACTCTCCACGTCACCCCCAAACCCTATATAAACTAACTCCCACTCCCTCATCCTCAACTCATTTCCAAACTTTAACGCGCCAAATTACAATCACCATGTCCTCTTCCTCTTCCTCCTTCTTCCCCGCCCATATCACCACCGACCAAGAATTCTCCCTCATCGTTGCCGCCCTCACCAACGTCGTCTCCGGCTCTACCTCCAGCTCCTCCGTCCCTGAATTCCGCTTCCCGCACTCCTCCCCGCCTCTTTCTGCCGCCAGCCTTATGCCGCCACCCCTGCCTAGCATCCACACGTGTCGCGAGTGCAACATCGCAGGATGCCTGGGATGCAACTTTTTCCCCGAGGAACAAAGGAAGAAATACAGAGGAGTTAGGCAGAGGCCTTCGGGAAAGTGGGCCGCCGAGATTCGCGATCGTCATCGTTCGGCCCGGGTCTGGCTCGGTACATTCGAAACCGCCGAGGACGCCGCCCGGGCCTATGACAAGGCCTCGTTCGAGTTACGCGGCCCACGGGCCAAGCTCAATTTCCCCTTGGTCGACGAGTCGCTCACTCTCCAGCCGGAGATGGCTGCAACAGAAGAGCAGATTAACAACGAGGATAATCTCAATCAAGGCATGGGAATGGACTCGCACGAATTCTGGGACAGGATCAACGAAGCTGATTTTCATCCGTTCATGATGATGATGGATTTTACTGGAGATTCTTCAGACTCTGCTGCCACTGGGTACACTCTCAGTTCCTGA 882 0.5306 MDELQWFGIGDLLRLGQRLRVIRFGFGAQSSENLAISLNCFAKTGPYSPRHPQTLYKLTPTPSSSTHFQTLTRQITITMSSSSSSFFPAHITTDQEFSLIVAALTNVVSGSTSSSSVPEFRFPHSSPPLSAASLMPPPLPSIHTCRECNIAGCLGCNFFPEEQRKKYRGVRQRPSGKWAAEIRDRHRSARVWLGTFETAEDAARAYDKASFELRGPRAKLNFPLVDESLTLQPEMAATEEQINNEDNLNQGMGMDSHEFWDRINEADFHPFMMMMDFTGDSSDSAATGYTLSS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1092 293 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 85 286 - -
Gso2g1092 293 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 85 286 - -
Gso2g1092 293 CDD AP2 165 223 IPR001471 GO:0003700|GO:0006355
Gso2g1092 293 Pfam AP2 domain 166 215 IPR001471 GO:0003700|GO:0006355
Gso2g1092 293 ProSiteProfiles AP2/ERF domain profile. 166 223 IPR001471 GO:0003700|GO:0006355
Gso2g1092 293 PRINTS Ethylene responsive element binding protein signature 167 178 IPR001471 GO:0003700|GO:0006355
Gso2g1092 293 PRINTS Ethylene responsive element binding protein signature 189 205 IPR001471 GO:0003700|GO:0006355
Gso2g1092 293 SUPERFAMILY DNA-binding domain 166 224 IPR016177 GO:0003677
Gso2g1092 293 Gene3D AP2/ERF domain 165 225 IPR036955 GO:0003700|GO:0006355
Gso2g1092 293 SMART rav1_2 166 229 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1092 Gso-Chr2 13738278 13745212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1092 90 239 AP2-EREBP Transcription Factor Family AT4G34410 42.188 4.21e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso2g1092 AP2 2.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1092 - - gsj:114372999 563.533