Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1090 ATGGAGATCATTGCCACCATTTTCTTTTGCATTTTACTCATCTTCTCATCCCTTATTCTTTCGTATCCATTAATAAAGAAACACAAGAAACAACAACACGTAGTAGCTAAGCCTAAGCTTCCCCCTGGCTCAATGGGCTGGCCTTACATAGGAGAGACCCTTCAACTCTATTCTCAAGACCCTAACATCTTCTTTGCTTCAAAGCAAAAAAGATATGGAGAAATTTTCAAGACACACATACTAGGTTGTCCATGCGTGATGTTGGCTAGCCCTGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAACCCACATACCCAAAAAGCAAAGAGAAGCTAATAGGCACTTCAGCATTGTTCTTCCACCAAGGAGAATACCACACTCGTATCAGGAAGCTGGTGCAAACCTCTCTCTCTCCTGAAACCATCCGAAAACTGATCCCAGACATCGAAACCGAGGTCGTTTCCTCTTTGGAATCGTGGGTTTCCACTGGACAAGTCATCAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGTCACTTGGAAGACAATTATAGAGACCAGCTTAAGGAAAACTACTGCATAGTGGAGAAAGGGTACAATTCTTTCCCTAACAGGATTCCCGGAACTGTATACTCCAAAGCACTCTTGGCAAGGAGGAGAATCAGGGAGATTATAAGTGAGATCATTTGTAAAAGAAAGGAGCAGAGATTGATGGAGATGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAAGAACAAACGCTAAGTGATGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGACCAAATGGCAGTATATGAAGCTAATGAAGGAGGGAAAAAGCCATTGACATGGGGTCAGACCAGAAATATGCCAACTACTCATAGGGTGATTTTGGAAAGCCTTAGAATGTCAAGTATCATATCATTTACTTTTAGGGAAGCTGTGGTTGATGTAGTATACAAAGGATATCTTATACCGAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTTCACCCTTCTCCTCACAATTTTGACCCATCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTTACACCATTTGGCAACGGAGTGCACTCTTGTCCAGGAAATGAGCTTGCCAAACTGAACATGTTCATTTTAATTCATCATCTAGTAACCAAATATAGGTGGGAAGTAGTGGGATATCAGAACGGAATCCAACATAGCCCATTCCCAGTCCCTCTGCATGGTCTACCTACAAGATTTTGGAGAAACGAATAG 1425 0.4168 MEIIATIFFCILLIFSSLILSYPLIKKHKKQQHVVAKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGTSALFFHQGEYHTRIRKLVQTSLSPETIRKLIPDIETEVVSSLESWVSTGQVINAFQEMKKFSFNIGILSVFGHLEDNYRDQLKENYCIVEKGYNSFPNRIPGTVYSKALLARRRIREIISEIICKRKEQRLMEMDLLGHLLNYKDEKEQTLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKADQMAVYEANEGGKKPLTWGQTRNMPTTHRVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVAPKPNTFTPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYQNGIQHSPFPVPLHGLPTRFWRNE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1090 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Gso2g1090 474 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 471 - -
Gso2g1090 474 Pfam Cytochrome P450 41 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 SUPERFAMILY Cytochrome P450 36 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PANTHER CYTOCHROME P450 26 11 471 - -
Gso2g1090 474 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g1090 474 Gene3D Cytochrome P450 29 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1090 Gso-Chr2 13715848 13719592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1090 4 473 Cytochrome P450 AT3G19270 69.002 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1090 K09843 - gmx:100793868 930.243