Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1085 ATGAACTTCAGGAACTTTGGTGTTGGAGATAACCACCCCACTTGGGATGCCATGCATGGGAAGACACCAGCAAATAATAATGTTACTAGCACTACTCTGCTGAGACAGCCCTCAACAATATACTCATTGACATTTGATGAGTTTCAGAGCACCATGGGTGGGATTGGGAAGGATTTCGGGTCCATGAACATGGATGAACTCTTGAAGAACATATGGACAGCTGAAGAGACTCAAGCCATGGTGTTTTCAGCCGTTGCCGCCGCAGGAGGAGTAGAAGGCCATAACAACAACAGCAACAACAACCCTATTAATTGTAGTGGTTTGCAAAGACAAGGCTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGAGGAGGTTTGGAGGGACTTGATCAAAGAAAGTGGTGGTGAGGCCAACGATGGTGGAAGTGGTGGCAATGGTGGCTCATCAAATCCTCAAATGCAAGCAACATTGGGAGAAATGACATTGGAGGAGTTTTTGGTGAGAGCTGGTGTTGTGAGAGAAGATGTTCCTCAACAACAACAAAATGGAAAACCAAACGACAATGGATGGTTTGGTGACTTTCCTAGACCAAACAATAACAACACTAGCCTACTTCTTGGGTTTCAACAACCAAATAGAAGTAATGGGAATGGGAATTTGGGTGAGAACACTAACTTAGTTTCAAAACAACAACCTCCTCCTTTATCATTAAACTCAAACCACTCTCAAAGACAAGCACAACACCAACACCAACACCAACAACATCCACCACCACTTTTTCCAAAGCCAGCAAATGTAACTTTTGCTGGTGCTCCTACGCATTTGTTGAACAATGCTCATCAACATGCTAGCCCTGGCAGAAGGGGAGGGTTGATTGGAGTTGCTGCTGAGCATTCAATGAATGTTGGAATGGTTGGTTTAGCCACAGCTAATGTCACAGCTTCTCCCTCAAGTAAAATATCACCAGATGTAATTACAAGGAGTAATAATAATGTTGATAACTCTCCAATATCACCACATTATGTAATCAACAGGGGAAGGAAATTCAGTGCCATAGAGAAAGTGGTTGAGAGGAGACAAAGGAGAATGATTAAAAATAGAGAATCAGCAGCGAGATCAAGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTTAAGGAATTAAACAGAGAATTACAAAGAAAACAGGAAGAAATCATGGAAATGAAGAAAAATAAGGATTTGGACCCTGCATGCAGACCAAGGATAAGTAAAATACAATGCTTGAGAAGGACACTTACTGGACCATGGTAG 1320 0.4242 MNFRNFGVGDNHPTWDAMHGKTPANNNVTSTTLLRQPSTIYSLTFDEFQSTMGGIGKDFGSMNMDELLKNIWTAEETQAMVFSAVAAAGGVEGHNNNSNNNPINCSGLQRQGSLTLPRTLSQKTVEEVWRDLIKESGGEANDGGSGGNGGSSNPQMQATLGEMTLEEFLVRAGVVREDVPQQQQNGKPNDNGWFGDFPRPNNNNTSLLLGFQQPNRSNGNGNLGENTNLVSKQQPPPLSLNSNHSQRQAQHQHQHQQHPPPLFPKPANVTFAGAPTHLLNNAHQHASPGRRGGLIGVAAEHSMNVGMVGLATANVTASPSSKISPDVITRSNNNVDNSPISPHYVINRGRKFSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQEEIMEMKKNKDLDPACRPRISKIQCLRRTLTGPW* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1085 439 CDD bZIP_plant_BZIP46 361 415 - -
Gso2g1085 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 364 379 IPR004827 GO:0003700|GO:0006355
Gso2g1085 439 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 23 439 - -
Gso2g1085 439 MobiDBLite consensus disorder prediction 178 257 - -
Gso2g1085 439 Gene3D - 359 416 - -
Gso2g1085 439 MobiDBLite consensus disorder prediction 178 272 - -
Gso2g1085 439 Coils Coil 380 414 - -
Gso2g1085 439 MobiDBLite consensus disorder prediction 1 23 - -
Gso2g1085 439 SUPERFAMILY Leucine zipper domain 361 409 IPR046347 GO:0003700|GO:0006355
Gso2g1085 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 359 410 IPR004827 GO:0003700|GO:0006355
Gso2g1085 439 SMART brlzneu 357 421 IPR004827 GO:0003700|GO:0006355
Gso2g1085 439 MobiDBLite consensus disorder prediction 136 156 - -
Gso2g1085 439 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 439 IPR043452 GO:0003700|GO:0045893
Gso2g1085 439 Pfam bZIP transcription factor 361 413 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1085 Gso-Chr2 13598661 13602739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1085 30 439 bZIP Transcription Factor Family AT1G49720 49.165 1.05e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g1085 bZIP_1 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1085 K14432 - gmx:100217340 813.913