Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1052 ATGGCAAAAGATTCTGCTGATGCTGATTCCCATCACAGACGTCTTGGTCTTTTGAAAGATCAAGTTCACTTGGTTAAAAGGAAAGGCTTTGATCGCTATGAGATTGCTCCAATCCAAGACCAACTAGCATTTGAGAAGGGTTTTTTCATAGTGATTCGTGCATGCCAATTGTTATCCCAAAAGAATGAAGGAATAATATTGGTTGGGGTGGCAGGTCCTTCAGGGGCGGGGAAGACTGTATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCAGTCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGGAATTTTGATGATCCACGCTTAACAGACTATGACACATTACTCCAGAATCTGCACGATTTAAAGGAAGGAAAGCCAGTTCAAGTTCCGATATATGATTTCAAGTCCAGTTCACGTACAGGATACAGGACAGTAGAAGTCCCGAGTTCTCGAATTGTGATTATAGAGGGCATCTATGCCTTGAGTGAGAAGTTGCGACCTCTGCTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATACAACGAGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCAGAGACGGTGTATCCAATGTACAAGGCATTTATCGAGCCAGATCTCCAGACAGCACACATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGTCCTACTTACATATTAAAGTCAGGAAGGAATGTAGAAGTTGATAAAATTAAAGCTGTTCTCGCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAAACTTGCCAATCATATTTACGGATGCGAAATAAAGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAACCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCTTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAGGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATAGACATTATGTTCAGGTACAAGGAAGAGATCGTTTAGTTCTAAAATATATAGGAGAACAGCTGGGTCTAGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGAATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCTAAAGAAGCACTATCTAGAGCCTCTGCCGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGAATATCACAGTCGTATACCAATCAGAGGGACAAAAATCTAGCTAAGGTTACTGGATATGGTGCCAACAATGGAAGGTTTGGTGAAAAAAATTTAGATTCCACCGCAATGCCAGTAAATCAGGGAGCGATCAATCAGCTTTCGGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAGTTAACCATAAAGAAAAGTTCTCCAAGTCAACAAAACATGTCACTTCAAGCTGAGACATGCAATGGATCTGCTCCCACCTCTCACTTCATCACTAGTTTGGGCAATGGTTCCCTAACTGGATCTAAAATGACAAATTCCTCTTCGTCGTCGCAGTTAGCTAAAGAGTCTCCTTTGATGGATGAGATATCAAGCATTGGACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGGAGCTTGGGGGAGAAGTCTCACCCAACAAGAACCAACAGCAGGAAAAGCATTGACATGTCATCGGATTCCGTGGGAGCTCGTGTTATGGTGGTGGCGGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAGGTTTTGTTGAACAAAAAGTGA 1995 0.414 MAKDSADADSHHRRLGLLKDQVHLVKRKGFDRYEIAPIQDQLAFEKGFFIVIRACQLLSQKNEGIILVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVQVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSGRNVEVDKIKAVLAEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGEQLGLEGSYIPRTYIEQIQIEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVTGYGANNGRFGEKNLDSTAMPVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLTIKKSSPSQQNMSLQAETCNGSAPTSHFITSLGNGSLTGSKMTNSSSSSQLAKESPLMDEISSIGRSQRQIMHQLDNLNNLLRGSLGEKSHPTRTNSRKSIDMSSDSVGARVMVVAAVGCLGIFLMKVLLNKK* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1052 664 MobiDBLite consensus disorder prediction 556 590 - -
Gso2g1052 664 Coils Coil 503 530 - -
Gso2g1052 664 PRINTS Uridine kinase signature 65 82 - -
Gso2g1052 664 PRINTS Uridine kinase signature 132 147 - -
Gso2g1052 664 PRINTS Uridine kinase signature 188 198 - -
Gso2g1052 664 PRINTS Uridine kinase signature 224 237 - -
Gso2g1052 664 Gene3D - 253 412 - -
Gso2g1052 664 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Gso2g1052 664 SUPERFAMILY CYTH-like phosphatases 263 407 IPR033469 -
Gso2g1052 664 PANTHER URIDINE KINASE 5 656 - -
Gso2g1052 664 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 656 - -
Gso2g1052 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 236 IPR027417 -
Gso2g1052 664 Pfam CYTH domain 269 404 IPR023577 -
Gso2g1052 664 CDD UMPK_like 67 239 - -
Gso2g1052 664 MobiDBLite consensus disorder prediction 614 635 - -
Gso2g1052 664 Gene3D - 66 245 IPR027417 -
Gso2g1052 664 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1052 Gso-Chr2 12642036 12661303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1052 66 236 PRT Gene Family AT5G40870 27.778 1.76e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1052 K00876 - gmx:100781286 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1052 2 12642036 12661303 Gso2g1052 2 12642036 12661303 ECH