Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1011 ATGATGCACAGAATTATGAATACTTTGACATGCTCTATGTACATTTTTATCTTGTATCTCTTACACCTACAACTCCTTGTACTTGCTGATAATGCCAGTTATGTTCCTTCGGAGAACATAGTTCTCAACTGCGGGTCCAACGTATCAAATGTAGTAGAATATGTTGATGGCAGGAATTGGAGTGGTGACATTGCATCACCCTATATGCCCTCCGATGCTGACACCAAGTTCCTGGTAGCCAGAGCCCCTAACACTCTTCAATCTATTCCTGAAGTTCCCTACATGACTGCTAGGATCTTTCAGTCTCAATTCACCTACACATTCAATGTAACCCCAGGTCCCAAATTCATTCGCCTTCACTTCTACCCAGCTTCCTACTTGAATCTCAACTTGTCCAATGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCATAACTTCAGTGTTTCCCTCAACGCTGATTACTTAAATGTAAACTATTTCATGAAAGAATTCATTGTCCATGTAAGTGGGAGAGTTTTAGAACTCACTTTCACCCCAACATATAATGCTTCTGATGCCTATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCACTTGGTTTATACAGTCGTGGTGATGATGCTCCTCTTCCTTTAGTTGGTCACTATCCCGAGCTTGTGTACATCTATAATGATTCTGCCATGGAAAACATATGCAGATTGAAAGTAGGAGGCGAGCAAATTCCACCCAAATATGACACAGGCATGTTTCGCACTTGGGACACTGATGGTGCTTACATTTTAGGGAGTGATACTGGTATTGAACCCTTTGATATGAGCATGCCAGTTTTGTATGATGGTAATGCTCCACCATATTTAGCCCCGGCAGATGTCTACCGCACATCTCGTTCAATGCGTACTTTTGAAAAAGGCCTTATCAATTTAAATTACAACATGACATGGTTTTTTCCCGTTGATTCAGGTTTTTTTTATCTAGTTAGGCTTCACTTCTGTGAAATTTATCACGGTATAACAAGGGTCAATGAGGTAGTTTTTACTGTGTTTTTAAATAATCAAACAGCTGAAGAACAATTTGATCCAATTGCTTGGAGTGGGAGGCCAGGAGTTGCTATACAACTAGACTATGTCGTGAAGGTTCCCAAAGTTAACGAGGCAAAGCAGGATTTGTGGCTTGATCTACACCCATACAAGGATTCTAAACCTATGTATTATAATTCTTTCTTGAATGGTGTGGAGATCTTTAAACTGAGCAATTTTGATGATAGGAATCTTGCAGGGCCCAACCCTTCTCAAAGCTTCGTGTCTGGATCAGATGTAAAGCCTCACCATGTTGCACAATTTAAGAAAAGTTCAGAGAAATTAAAATTCATCATAATTGGATGTGGACTTGGTACAGTGGTACTACCAATTCTCCTTTGCTTAGTTCTATTCAGGTTAAAGGTGATTAGACCTAGAAAGGTCATGTCATGGTGCGGTCTTGCTGTCCACACTCCTAATCAAATTGAAAAGGCAAAGAAGTCATCATTTTGCAGTCATTTCCCAATAAGAGAGATAAAAGTGGCAACAAATGACTTCGATGAGGCTCTACTTATAGGCACTGGTGGATTTGGAAGTGTTTACAAGGGTAGCTTTGATGGTGGGGCAACTTCTGTGGCCATAAAACGTGCCAATCCAATGTCACACCAAGGTGTTTCAGAATTCGAGACAGAGATCCTTTGGCTCTCACAGCTTAGGCATGCCAACCTAGTCTCACTTTTGGGTTACTGCAATGAAGATGGGGAGATGATATTGGTCTATGACTTCATGGACAATGGAACTCTATATGAACATCTTCATTTGAGGCAGAGAGATCAACCCCCTTTGTCTTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTACACTACCTACACACTGGCACAAAGCACAGGATCATCCACCGTGACATAAAGACAACCAACATACTCTTAGATCATAATTGGGTGCCAAAAATTTCAGATTTTGGTTTGTCAAAGGCAGGTTACCCTTCCATACTCATCACCAATGTCAAGGGTAGTATTGGTTACCTAGATCCTGAGTGTTTTCAAAGCCACAAGTTGACTGAGAAATCTGATCTATACTCACTTGGGGTGGTGTTACTCGAGATTCTAAGCACAAGGCCTGCGGTAATTGTAGGTGAAGATGATGAGCATGTAAACTTGGCCGAATGGGCTATGTTGTGCTTTGAGAATGGCAACTTGGAGCAAATAGTTGACCCCAACTTGAAAGGAAACATAGTTGAAGAGTGCTTTGAGTTATATTTAGGATTTGCAATGAAATGTTTGGCTGAAAGAGGGGTGGAGAGGCCATCCATTGGTGAAGTGCTACAGAACCTTGTTTTAGCGATGCATCTTCAGAAAAAGGGTGGTGTTGTCCCCGATGGAAATGTTCAAAGAAATGATAATTCTGGTTTACAGGGTTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGAAATCATGATGCCTGTTGGTCGGTGA 2541 0.4124 MMHRIMNTLTCSMYIFILYLLHLQLLVLADNASYVPSENIVLNCGSNVSNVVEYVDGRNWSGDIASPYMPSDADTKFLVARAPNTLQSIPEVPYMTARIFQSQFTYTFNVTPGPKFIRLHFYPASYLNLNLSNAFLSVSAANFTLLHNFSVSLNADYLNVNYFMKEFIVHVSGRVLELTFTPTYNASDAYAFVNGIEVVSMPLGLYSRGDDAPLPLVGHYPELVYIYNDSAMENICRLKVGGEQIPPKYDTGMFRTWDTDGAYILGSDTGIEPFDMSMPVLYDGNAPPYLAPADVYRTSRSMRTFEKGLINLNYNMTWFFPVDSGFFYLVRLHFCEIYHGITRVNEVVFTVFLNNQTAEEQFDPIAWSGRPGVAIQLDYVVKVPKVNEAKQDLWLDLHPYKDSKPMYYNSFLNGVEIFKLSNFDDRNLAGPNPSQSFVSGSDVKPHHVAQFKKSSEKLKFIIIGCGLGTVVLPILLCLVLFRLKVIRPRKVMSWCGLAVHTPNQIEKAKKSSFCSHFPIREIKVATNDFDEALLIGTGGFGSVYKGSFDGGATSVAIKRANPMSHQGVSEFETEILWLSQLRHANLVSLLGYCNEDGEMILVYDFMDNGTLYEHLHLRQRDQPPLSWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSILITNVKGSIGYLDPECFQSHKLTEKSDLYSLGVVLLEILSTRPAVIVGEDDEHVNLAEWAMLCFENGNLEQIVDPNLKGNIVEECFELYLGFAMKCLAERGVERPSIGEVLQNLVLAMHLQKKGGVVPDGNVQRNDNSGLQGYSDLTPGVEFSEIMMPVGR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1011 846 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Gso2g1011 846 SMART serkin_6 529 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1011 846 Pfam Protein kinase domain 534 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1011 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Gso2g1011 846 SUPERFAMILY Protein kinase-like (PK-like) 514 801 IPR011009 -
Gso2g1011 846 ProSiteProfiles Protein kinase domain profile. 529 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g1011 846 PANTHER FERONIA RECEPTOR-LIKE KINASE 27 846 - -
Gso2g1011 846 Pfam Malectin-like domain 42 419 IPR024788 -
Gso2g1011 846 PANTHER OS07G0166700 PROTEIN 27 846 IPR045272 GO:0004714|GO:0006468
Gso2g1011 846 CDD STKc_IRAK 535 799 - -
Gso2g1011 846 Gene3D - 231 421 - -
Gso2g1011 846 Gene3D - 39 202 - -
Gso2g1011 846 Gene3D Transferase(Phosphotransferase) domain 1 606 811 - -
Gso2g1011 846 Gene3D Phosphorylase Kinase; domain 1 495 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1011 Gso-Chr2 11914375 11917473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1011 23 846 Receptor kinase-like Gene Family AT3G51550 47.598 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso2g1011 Malectin_like 4.9e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1011 - - gmx:100776859 1697.18