Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0975 ATGAACATGGTTTTTTCTCTGTCCATTGGCTCTTCTGCTGCATTGCCCCTCAGATGCACCTCCAAGCTCACTTCTTTCAGGGTTGCTTCTGCTGATGCCGATGGCTTCCCTTCATTTCTCCCCAGAGAACTTCACACCATTCAAGACCCTTTTGCCAGAAAATTCGCCTTGCGCATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAACCACTGGTGCAGACCAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTCTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACATGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGGAAAACTTCCTCCCTGTGATGTGGTATCCAAGCGTGATCACTTCTACCAGTTTTGGAAGTCTTACATTAGAAGGCCAATTATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCCGTTGACTTTGCGGTCAATTATCCAGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATTCTGAGGGAACTGGAAAGCTAGCAACCTTACCCAGAGCAGTAGCCTATGCCGGGGTTAATTTATTGAAGAGCCTTCCGTTACGCTTATATGCCACCTATTTGACCTTCACAAAAATTTCCTTCAGCACCAGCCTTGATTGGACTAATGTGGGCCGTTTGCATTGTTTCTTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTTCTCCATTGATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCGACTCCACTGTGAATTACCTGATGCAATTATACGCCAAATACCAAATTGTGGACATCTTCCTCATCTGGAAAGACCAGATTCTACTATCAAACTAATTGTTGAATTTGTGCAAAGAGAGAGCAAGACATTAAGTCAATGTGTTGCACAAGTATGA 1035 0.4377 MNMVFSLSIGSSAALPLRCTSKLTSFRVASADADGFPSFLPRELHTIQDPFARKFALRIQRLPVPVRFSENPIMSSCVKPLVQTKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLGKLPPCDVVSKRDHFYQFWKSYIRRPIILVGPSLGSAVAVDFAVNYPEAVEKLVLIGASVYSEGTGKLATLPRAVAYAGVNLLKSLPLRLYATYLTFTKISFSTSLDWTNVGRLHCFLPWWDDATVDFMTSGGYNVSPLIGKVKQKTLIIWGENDRIISNKFAVRLHCELPDAIIRQIPNCGHLPHLERPDSTIKLIVEFVQRESKTLSQCVAQV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0975 344 PRINTS Alpha/beta hydrolase fold signature 113 128 IPR000073 -
Gso2g0975 344 PRINTS Alpha/beta hydrolase fold signature 158 171 IPR000073 -
Gso2g0975 344 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Gso2g0975 344 PRINTS Alpha/beta hydrolase fold signature 276 290 IPR000073 -
Gso2g0975 344 SUPERFAMILY alpha/beta-Hydrolases 87 332 IPR029058 -
Gso2g0975 344 Gene3D alpha/beta hydrolase 80 338 IPR029058 -
Gso2g0975 344 Pfam Alpha/beta hydrolase family 89 322 IPR000073 -
Gso2g0975 344 PANTHER ALPHA/BETA FOLD HYDROLASE 1 344 - -
Gso2g0975 344 PRINTS Epoxide hydrolase signature 93 111 IPR000639 GO:0003824
Gso2g0975 344 PRINTS Epoxide hydrolase signature 113 128 IPR000639 GO:0003824
Gso2g0975 344 PRINTS Epoxide hydrolase signature 172 185 IPR000639 GO:0003824
Gso2g0975 344 PRINTS Epoxide hydrolase signature 307 329 IPR000639 GO:0003824
Gso2g0975 344 PANTHER HYDROLASE 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0975 Gso-Chr2 11342182 11349051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0975 88 330 Acyl Lipid Metabolism Gene Families AT3G10840 24.841 4.23e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0975 - - gmx:100800197 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0975 2 11342182 11349051 Gso2g0975 2 11342182 11349051 ECH
Gso1g0501 1 7764592 7771376 Gso2g0975 2 11342182 11349051 GST