Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0961 ATGGATTTGAAAGTAACTCTATGTTATGTTGTTCTTTTATTATTATTTTCCCTGTCTTCAGCAGAAGATGTTAAACTCGAAGTGAAAGGGGTGGCAAGCATCGCTAACACAGATGATAATTTTATCTGCGCAACATTGGACTGGTGGCCTGCTAATAAGTGTGACTATGACCAGTGTCCATGGGGACAAGCAGGCATTCTCAATCTGGACTTGGATAACAAAATTCTAACAAATGCTGTCAAGGCATTTAATCCCCTGAGGATCAGATTAGGTGGCTCACTGGAAGATCAGATTGTTTACCAATTTGGGAAGCAAAAGAAATGCCCACATTTCAAAAAGAAGGCTGATGGTCTTTTTGGTTTCAGCCAAGCCTGCCTTCCCAAAGTGAGATGGGATGAAGTAAATGACTTCTTTAACAAAACTGGAGTGAAATTAATTTTTGGGTTGAATGCTCTCACTGGGAAGAGAAATTCTGCAGAGGACAAGAAGAACTGGGTTGGAAATTGGAATCCAAAAAATGCAATAAGTCTCATGAAGTACACAATATCAAAAGGATACAAAATAGATTCATATGAATTGGGAAATGAGCTATGTGCTGAGGGGATATCAGCCAGAGTAGACAGTGTTGAATATGCTAAAGACATCACTAGGCTCAGACATATAGTTAATCTACTGTACCCAATTGCTTCTACAAGGCCTAAAGTGCTAGGACCTGGTGGTTTCTATGGTAAGGAATGGTTTTCTAGCTTCTTAATGAATGTTGGGCCTGGTGTGGTTGATGGAATCACTCACCACATTTACAACCTTGGTGCTGGTGTTGACAAGGATCTCATCAATAGGGTTCAAGACCCATATTTATTGAGCCAAGTTGCTGAAACTTACAAAAGTGTAGCTCAAGCAGTCAAGGAATTCACACCATGGGCTGGACCATGGGTTGGGGAATCTGGTGGAGCCTATAACAGTGGTGGCAAAGATGTGTCAAATACTTTTGTTAATGGCTTTTGGTACTTGGATCAGCTGGGCATGACATCAACCTTAAACCACAAGGTTTATTGTAGACAAACTCTAATCGGAGGAAACTATGGTTTGCTAAACACCACAACCTTTATTCCTAACCCGGATTATTATGGAGCTCTTCTGTGGCATCGACTTATGGGAAGCAAAGTGCTTTCTGTTTCTCACGAAGGATCTCCATTTCTGCGTACATATGCTCATTGTTCAAAGAAAGGGCCTGGTATCACTGTGCTACTCATAAACATGTCCAATTCCACAACTTTCAATGTGTTCCTCATCAATGACATGAATCTGTACCCAGTCCTGAACACAGTACGAAGTGTACCAATGAAGATGAGGGAAGAATACCATTTGACACCAAGAGATGGTAACATTCAAAGTGATGTGGTGATGTTGAATGGAACTCCATTGGTGCTGACCAAGTCACTAGACATTGCAGAAATGAAACCAAAGCTGGTTGATCCATCTTCTTCAATCAAAGCAGGGCCTGATTCCATAGTATTTGTACAAATCAAGAGCTTCAATGCACCAGCATGCGCATAA 1557 0.4104 MDLKVTLCYVVLLLLFSLSSAEDVKLEVKGVASIANTDDNFICATLDWWPANKCDYDQCPWGQAGILNLDLDNKILTNAVKAFNPLRIRLGGSLEDQIVYQFGKQKKCPHFKKKADGLFGFSQACLPKVRWDEVNDFFNKTGVKLIFGLNALTGKRNSAEDKKNWVGNWNPKNAISLMKYTISKGYKIDSYELGNELCAEGISARVDSVEYAKDITRLRHIVNLLYPIASTRPKVLGPGGFYGKEWFSSFLMNVGPGVVDGITHHIYNLGAGVDKDLINRVQDPYLLSQVAETYKSVAQAVKEFTPWAGPWVGESGGAYNSGGKDVSNTFVNGFWYLDQLGMTSTLNHKVYCRQTLIGGNYGLLNTTTFIPNPDYYGALLWHRLMGSKVLSVSHEGSPFLRTYAHCSKKGPGITVLLINMSNSTTFNVFLINDMNLYPVLNTVRSVPMKMREEYHLTPRDGNIQSDVVMLNGTPLVLTKSLDIAEMKPKLVDPSSSIKAGPDSIVFVQIKSFNAPACA* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0961 518 SUPERFAMILY (Trans)glycosidases 37 385 IPR017853 -
Gso2g0961 518 Gene3D Glycosidases 63 383 - -
Gso2g0961 518 PANTHER OS07G0598400 PROTEIN 12 518 - -
Gso2g0961 518 Pfam Glycosyl hydrolase family 79, N-terminal domain 24 341 IPR005199 GO:0016020|GO:0016798
Gso2g0961 518 PANTHER HEPARANASE-RELATED 12 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0961 Gso-Chr2 11133839 11137063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0961 1 518 Glycoside Hydrolase AT5G61250 49.353 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0961 K07964 - gmx:100803057 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0485 1 7298164 7300363 Gso2g0961 2 11133839 11137063 GST
Gso18g1153 18 21875949 21880668 Gso2g0961 2 11133839 11137063 PCT