Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0942 ATGGCTGGCGGCGGAGGTGGAGACCGGCCGCCGTGGAAGGAGGCGGAGCCGCCTCGACCCACCATCACTCTGCCGCCGCGGTCTGGTTCCATGGAGTCCCTTTTCAATGGAGGATTCAGCCCTGGTCCCATGACTCTGCTTTCTAGCTTTTGGGGTGATGGGGATGATGGAAAGTCCTTCTCTCAGCTCCTCGCTGGAGCTATGTCTTCTCCGGTGGCCGGAGCTGTCGCCCCCGGCGTGATGGACTCACCTGGCCTCTTTTCATCTTCTCAGGTGTCTTTTGGAATGACACACCAGCAGGCCCTAGCACAGGTCTCAGCTCAGGCTTCACAAGCCAACTCCAATATGCATATCCAAGCCGAACATTCATTGACACAGGCTCCTGCAGCTGCTTCCAATACAACTCAACAGCTGATGCCACCTCTAACTTCTGACTCTTGGGCTGCAATGACTGAATCCATTGATCATTCTCACTCAGAACAAAGATTGCAATCATCATTGTTGAATGTTGATAAGCCTGCAGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACAGGTCAAGGGTAGTGAGTTTCCTCGAAGTTATTACAAGTGCACGAATCCAAACTGTCCTGTCAAGAAAAAGGTCGAGCGCTCGCTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAATGTCCTCATCCTAACAAGTGCTCAAAAGACACCATGACTTCAAATGAAAATTCAAATATGCAAGGGAATGTAGATTCAACGTATCAAGGGACGAGTACAAACTCAATGTCTAAGATGGATCCCGAGTCAAGTCAGGCAACAGCTGATCGTCTATCAGGAACAAGTGACAGCGAGGAAGTAGCTGATCATGAAACTGAAGTGGATGAGAAAAATGTTGAGCCTGAGCCCAAGAGGAGAAAAGCAGAAGTCTCGCAGTCAGATCCACCTTCTTCACATAGGACTGTCACCGAGCCTCGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGGTATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACGCAAGGTTGCAATGTGCGGAAGCATGTGGAGAGGGCTTCAACAGACCCTAAAGCTGTCATAACGACATATGAAGGAAAACACAATCATGATGTGCCAGCAGCTAAGACTAACAGCCACACTATGGCCAGCAATACTGCATCACAGTTAAAATCACATAACACCAATCCCGAGAAGCATAATTTTGGCAGCAGAGGTATGGGAGGAAATGAACAACAGCCGGTCGCACGGCTTCAGTTGAAGGAAGAGCAGATCACCTAG 1368 0.4817 MAGGGGGDRPPWKEAEPPRPTITLPPRSGSMESLFNGGFSPGPMTLLSSFWGDGDDGKSFSQLLAGAMSSPVAGAVAPGVMDSPGLFSSSQVSFGMTHQQALAQVSAQASQANSNMHIQAEHSLTQAPAAASNTTQQLMPPLTSDSWAAMTESIDHSHSEQRLQSSLLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTNPNCPVKKKVERSLEGHVTAIIYKGEHNHQCPHPNKCSKDTMTSNENSNMQGNVDSTYQGTSTNSMSKMDPESSQATADRLSGTSDSEEVADHETEVDEKNVEPEPKRRKAEVSQSDPPSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTQGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTMASNTASQLKSHNTNPEKHNFGSRGMGGNEQQPVARLQLKEEQIT* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0942 455 SMART WRKY_cls 174 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 14 454 - -
Gso2g0942 455 MobiDBLite consensus disorder prediction 411 430 - -
Gso2g0942 455 MobiDBLite consensus disorder prediction 1 37 - -
Gso2g0942 455 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 454 IPR044810 GO:0003700
Gso2g0942 455 SUPERFAMILY WRKY DNA-binding domain 172 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 MobiDBLite consensus disorder prediction 286 317 - -
Gso2g0942 455 MobiDBLite consensus disorder prediction 236 285 - -
Gso2g0942 455 MobiDBLite consensus disorder prediction 411 455 - -
Gso2g0942 455 Pfam WRKY DNA -binding domain 175 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 MobiDBLite consensus disorder prediction 228 328 - -
Gso2g0942 455 Gene3D WRKY domain 161 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 ProSiteProfiles WRKY domain profile. 175 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g0942 455 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0942 Gso-Chr2 10901478 10906679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0942 19 455 WRKY Transcription Factor Family AT2G03340 51.440 5.08e-148 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g0942 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0942 - - gmx:100799335 924.465