Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0923 ATGGAGAACAGAACAAGCTCTGTACTCCCACCTGGCTTCAGGTTTCATCCCACTGATGAAGAACTAATTGTTTACTATCTTTGCAACCAAGCCACATCAAGACCATGCCCTGCATCAATCATCCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGAAAAAACAGACTTTGGAGAAAAGGAGTGGTACTTCTTTAGTCCACGAGAGAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACCGTGTCTGGGTATTGGAAGGCCACTGGCACAGATAAAGCAATCTATAGTGGGTCTAAGCATGTAGGGGTGAAGAAGGCTTTGGTTTTTTATAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAATAGACAAGTTGGATCCATGAGGCTAGACGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACATTGGAAAGTCAATGGAGGCAAAAGAGGAATACCCAATAGCCCAAATCAATCTTACACCAGCAAACAATGACAGTGAACAAGAAATGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATATTATCTGATGCCACATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTCGTAAAACCACAGCCGGTTGAAATCCCTTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAAAATAGCACCATCAACCCCACCATATTTGTGAACCAAGTGTATTATCAAAGAGGATAA 840 0.4143 MENRTSSVLPPGFRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPEKTDFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKSMEAKEEYPIAQINLTPANNDSEQEMVKFPRTSSLTHLLEMDYLGPISHILSDATYNSTFDFQINTANGGIDPFVKPQPVEIPYAADSGKYQVKQNSTINPTIFVNQVYYQRG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0923 279 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Gso2g0923 279 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Gso2g0923 279 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Gso2g0923 279 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Gso2g0923 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 3 234 - -
Gso2g0923 279 PANTHER NAC TRANSCRIPTION FACTOR 56 3 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0923 Gso-Chr2 10564994 10566869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0923 1 216 NAC Transcription Factor Family AT1G69490 67.982 1.73e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso2g0923 NAM 3.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0923 - - gmx:100170717 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0923 2 10564994 10566869 Gso2g0923 2 10564994 10566869 ECH