Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0915 ATGCCGACACTGAAACTCTCCCTCTTCGTCTCCCTCCCAAAACCCTTAAACCTCAGACCCCAATTTTCGCGCCACCCAATAAACCCAAACCCGACAACCTCGGACCGTGGCCTCGTATTCCACGAAAAAGTGCTCTACCTTAAAGCCCTCAAAGTGAACCCCGACAAGGCCTTCCGCTTAAACCCCACCCTCCGTTCCTCTCCTCTCTCAACCCTTAAATCGGTGACGCGCTCCCTTTCTTCATTGGGCATTCCACGCGCCTCCATGGGTCGAATCCTCGACATGCTCCCCGTGCTCCTCACGTGCGACCCCTATTTCCAATTCTACCCCCTCCTCGACTTCCTCCTCCACGAGGTCCCAATCCCCTACCACGACATCCACCTTTCAATCCTGCGCTGCCCTAGATTACTCGTTTCCAGCGTTAACAACCGATTGCGACCAACTTTACACTTTCTGAGGAAATTAGGGTTTAATGGGCCCCACTCGCTCACGTGTCAGACCACATTGCTTCTCGTTTCCAGCGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGGGTTTGGGGTTCACTCACGAAGAGGTGGCTAACATGGTCGTGAGGTCACCTGGGTTGTTGACTCTTAGTGTGGAGAAGAATTTGAGGCCCAAGGTGGAGTTTTTCTTGAGGGAGATGAATGGGGATGCTGCTGAGCTCAAGAGGTTTCCGCAGTATTTTTCTTTTAGCTTGGAACGGAGGATTAAGCCGCGGTACGGGATGCTGAGACGGGTTGGCGTGTCGATGGATTTGGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTAAGGCTAGGTTGCTTGATTTAAGGTTTAAGAAACTTGAGATAGGAGTAGGACAACATTTGTATTAG 891 0.5107 MPTLKLSLFVSLPKPLNLRPQFSRHPINPNPTTSDRGLVFHEKVLYLKALKVNPDKAFRLNPTLRSSPLSTLKSVTRSLSSLGIPRASMGRILDMLPVLLTCDPYFQFYPLLDFLLHEVPIPYHDIHLSILRCPRLLVSSVNNRLRPTLHFLRKLGFNGPHSLTCQTTLLLVSSVEDTLLPKIEFLKGLGFTHEEVANMVVRSPGLLTLSVEKNLRPKVEFFLREMNGDAAELKRFPQYFSFSLERRIKPRYGMLRRVGVSMDLEDMLKVSDGGFKARLLDLRFKKLEIGVGQHLY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0915 296 PANTHER CGI-12 PROTEIN-RELATED 25 288 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 90 122 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 55 85 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 197 229 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 Gene3D Transcription termination factor 3, mitochondrial 41 287 IPR038538 -
Gso2g0915 296 Pfam mTERF 63 275 IPR003690 GO:0003690|GO:0006355
Gso2g0915 296 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 25 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0915 Gso-Chr2 10461704 10464199 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso2g0915 mTERF 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0915 K15032 - gmx:100785219 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0431 1 5923699 5925054 Gso2g0915 2 10461704 10464199 GST