Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0910 ATGGATCCACAAAACATGCAAAACCAAACCATGCATTTTGTGCTGTCCACTGATTCCAAACCAAGGCTAAAATGGACTCCTGAGCTTCACCGACGATTCATTGAGGCTACCAATCAGCTTGGAGGTGAAGATACAACTCCAAAGAGTCTCATGAGGGTGATGGGGATTCCAGGACTCACTTTGTACCATCTGAAGAGCCATTTACAGAAATTTAGACTTGGAAAAAGCCAACAACTAGAAACCTGTTCTGACAACAAACAAGAAGATTACATAGAAACCAAGAGCAGCAGTGATGGTCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAATTACTGAAAACATGCAGATTGCTCAAGCTCTCCAAATGCAAATGGAAGTGCAAAGGAAACTCTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTCAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAGGCACAAGAAGCACTTGCTGGATACAATTCTTCCCCAGTTGGGATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACGATGCTTGTCCAAGTTCTCCCATCTCAGAACTGACAGAAACAAGAGGGTTGAGTTTAAGCTGTGGGGAGAGGAAAAGAGACAGAGGCACTATGTGTTCACTGGAAAGTTCCTTGACATCTTCTGAAAGCTCAGGGAGAAAGGAAGAGAAACAGCCAATGGAAGAGATTGTGGAATTCAAGAGTTCCAATAATGTTTCATTTGAATTGCCATTGATGGAGATTCACACTGAGGATAAAGCATCCAATGGAGGCTTATCAAGCAATGAGGGTAGTGGGAGAAAGAGAAGTTTAGCAGCAACAGAATCTGATGATGGAAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACAAGTTGTTGAGGAAAGTCAAGTTGTCAGAAATGCTTGACTTGAACAGCCAATGTCAGAGTGACATGGACTCAACAGGTTCAAAAACATTGGACTTAAATTGCAGTTTAAACTTTTGGGAACCATGA 1053 0.4217 MDPQNMQNQTMHFVLSTDSKPRLKWTPELHRRFIEATNQLGGEDTTPKSLMRVMGIPGLTLYHLKSHLQKFRLGKSQQLETCSDNKQEDYIETKSSSDGHCSREISLGAQNQITENMQIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINDACPSSPISELTETRGLSLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQPMEEIVEFKSSNNVSFELPLMEIHTEDKASNGGLSSNEGSGRKRSLAATESDDGSCVVEQPCGKRCGNKLLRKVKLSEMLDLNSQCQSDMDSTGSKTLDLNCSLNFWEP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0910 350 Gene3D - 17 77 - -
Gso2g0910 350 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 347 - -
Gso2g0910 350 MobiDBLite consensus disorder prediction 220 243 - -
Gso2g0910 350 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 74 IPR006447 GO:0003677
Gso2g0910 350 Coils Coil 120 140 - -
Gso2g0910 350 Pfam Myb-like DNA-binding domain 22 70 IPR001005 -
Gso2g0910 350 MobiDBLite consensus disorder prediction 267 291 - -
Gso2g0910 350 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
Gso2g0910 350 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
Gso2g0910 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 76 IPR017930 -
Gso2g0910 350 MobiDBLite consensus disorder prediction 270 285 - -
Gso2g0910 350 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 347 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0910 Gso-Chr2 10376405 10378657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0910 11 306 G2-like Transcription Factor Family AT1G69580 49.677 1.93e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso2g0910 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0910 - - gmx:100787178 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0910 2 10376405 10378657 Gso2g0910 2 10376405 10378657 ECH
Gso1g0423 1 5773261 5775681 Gso2g0910 2 10376405 10378657 GST