Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0889 ATGAACGTGGATCTGGAATCATTGGCAGAGGCAACTTCTGGGGCCATAGGATCACTGATCAGCACCACTATTCTCTACCCCCTTGACACCTGCAAGACCAAGTACCAGGCTGAGGCACGTTCCTCAGGTCGAACAAAATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAACCGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCACAATTTGTCTACTTCTACGGATACAGCTATTTTAAAAGACTGTATCTAGAAAAAAGTGGTTATAAATCCATTGGAACAAAAGCAAACTTGGTTATTGCTGCTGCTGCTGGGGCTTGCACAGCCATTGCGACTCAGCCTCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGAATTTGGAAAGTCTAAAGGGCTACTGAAGACCCTTACAGAAGGAAACTGGAGTGATGCATTTGATGGCCTCAGTATTTCCTTGCTGCTGACATCAAACCCTGCAATTCAGTATACGGTGTTTGATCAGCTTAAACAACGAGCACTGAAGAATAAACAAGACAATGCTGATAAAGGAACATCTCCAGCGTCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCAATTTCAAAGAGCATTGCTACCTGTCTAACATATCCAGCTATCAGGTGCAAAGTTATCATTCAAGCTGCAGACTCAGCTGAAGAAACCTCCAAAACAAAGATAAAATCACAGAAAACAGTGCTTAGTGTTCTCTATGGAATATGGAAAAGGGAGGGCATACTGGGATATTTTAAAGGATTGCATGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAAAAGATCTCTGCTTCTACCTGGGTGCTTATCCTTGCACTTAAAAGGTACCTATTACTTCCAAGGGGTAAGGTTAAGAACTTGTAA 957 0.4222 MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQAEARSSGRTKYRNLTDVLLEAISNRQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSEFGKSKGLLKTLTEGNWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQDNADKGTSPASLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSAEETSKTKIKSQKTVLSVLYGIWKREGILGYFKGLHAQILKTVLSSALLLMIKEKISASTWVLILALKRYLLLPRGKVKNL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0889 318 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Gso2g0889 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Gso2g0889 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Gso2g0889 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Gso2g0889 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Gso2g0889 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Gso2g0889 318 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Gso2g0889 318 Pfam Mitochondrial carrier protein 202 293 IPR018108 -
Gso2g0889 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Gso2g0889 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Gso2g0889 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Gso2g0889 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Gso2g0889 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0889 Gso-Chr2 10145626 10149570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0889 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 28.525 9.49e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0889 - - gmx:100301879 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0889 2 10145626 10149570 Gso2g0889 2 10145626 10149570 ECH
Gso1g0396 1 5302767 5306725 Gso2g0889 2 10145626 10149570 GST