Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0882 ATGTGGATCCAAGGATTCAGTTTTTGGATCAAAGGTTTCTCTTTGCTGGCCTTAATATCTGTAATTTCCGCTCTGGAACCCGAACTGGGATCGACCCGCGTCGTCTTTCAGACAAAGTATGGAGATATTGAATTTGGTTTCTATCCAACTGTTGCACCTAAAACTGTGGACCACATTTATAAGCTTGTGCGACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGATTCGTGGCCCAAGTAGCAGATGTTACAAATGGAAGATCAGCTCCAATGAACGAGGAACAAAGAAGGGAAGCTGTAAAGACTGTTGTTGGTGAATTTACTGAAGTCAAACATGTTCGGGGTATTCTTTCCATGGGAAGATATGATGATCCAGACAGTGCTTCATCTTCATTTTCAATACTACTTGGAGATGCCCCTCATCTTGATGGCAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGATGAAACGTTGACAAAGCTCGAGCAACTACCTACCCGCAAAGAGGGTATATTTGTAATGCCGATGGAACGCATCACTATCCTGTCGTCATATTACTATGAGACAGAAAATTGCGAGGAAGACAGATCAATTTTGAAGCGCAGACTAGCCGCCTCAGCTATTGAAGTTGAAAGACAGAGGATGAAATGCTTCCCCTGA 675 0.4252 MWIQGFSFWIKGFSLLALISVISALEPELGSTRVVFQTKYGDIEFGFYPTVAPKTVDHIYKLVRLGGYNTNHFFRVDKGFVAQVADVTNGRSAPMNEEQRREAVKTVVGEFTEVKHVRGILSMGRYDDPDSASSSFSILLGDAPHLDGKYAIFGKVTKGDETLTKLEQLPTRKEGIFVMPMERITILSSYYYETENCEEDRSILKRRLAASAIEVERQRMKCFP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0882 224 SUPERFAMILY Cyclophilin-like 31 192 IPR029000 -
Gso2g0882 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 224 - -
Gso2g0882 224 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 187 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 41 191 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 CDD cyclophilin 35 188 - -
Gso2g0882 224 Gene3D - 23 198 IPR029000 -
Gso2g0882 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Gso2g0882 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 224 IPR044233 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0882 34 192 U-box Gene Family AT5G67530 27.711 2.14e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0882 - - gmx:100819238 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0882 2 10028458 10035167 Gso2g0882 2 10028458 10035167 ECH