Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0861 ATGTATCATTCTCCAATCTTCCTCCTTAACCCCAAAACCAAACCTCTTAGCCTCTCTTTCTTTTTATTTCTCTTTCTCTCCACCTTGATGGCAGAAGATCAAGGTTCACATGCTATAGACTTCCATTTGGGAAACCATTTATTAGTTTCCTCCAATTCTGATAACTCGGGAGAAAGTAAAAACAACATGAAGCCACTGAACCAACAAAATGAAGAAGGTGAAGCACTCGTGAATAAGAAGCGAAATCGAGAGATCGCGAGTGAAAATGAGAAAGACAATATTACTAGCGATGAAGGGTTAGATGGAAAACATCCAGAATCTAATAACGAAATGTTTGACGACCTTCGTGGTTTGCTTCCGCAACTTCCTTCCGAGGCGGATGAAGCAACCGTTATTAAGGTAGCAGCTAACTACATTAAAGGTCTGGAGGAAAGCCGCAAAAGGCTAGGGAAAATAACTAAGAGAATGTTCCCATATGTTTTCAAAGAAATAATGGGAACTTCAGATACAATTTTAATCAATGGGAAGAAGAAATTAGAATTTGACAAAGTATGGACTTCTTCAAACATGGTCTTGAACATTCATGCCAATTGGGCCCAATTCACAGTTTGCTCCGCCTACAAGCCACACCTCTTGAACACCATCACTTCTGTGTTGGAGAGGCACAACATAGAGGTCATTGCTGCCAACGTTTCATTCAATCATAATGAAAATGGAAAGACATGCATGATTCTAGTTCATGCAAAACAAGTTTCAGATGAAAATTCAGCTGAGGAGACTTACAAGGATGCGTCTGGAGAGATTTTCTCATTGATCTCTTAA 822 0.3954 MYHSPIFLLNPKTKPLSLSFFLFLFLSTLMAEDQGSHAIDFHLGNHLLVSSNSDNSGESKNNMKPLNQQNEEGEALVNKKRNREIASENEKDNITSDEGLDGKHPESNNEMFDDLRGLLPQLPSEADEATVIKVAANYIKGLEESRKRLGKITKRMFPYVFKEIMGTSDTILINGKKKLEFDKVWTSSNMVLNIHANWAQFTVCSAYKPHLLNTITSVLERHNIEVIAANVSFNHNENGKTCMILVHAKQVSDENSAEETYKDASGEIFSLIS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0861 273 MobiDBLite consensus disorder prediction 52 73 - -
Gso2g0861 273 PANTHER TRANSCRIPTION FACTOR BHLH95 50 270 - -
Gso2g0861 273 MobiDBLite consensus disorder prediction 74 111 - -
Gso2g0861 273 MobiDBLite consensus disorder prediction 52 112 - -
Gso2g0861 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 149 IPR036638 GO:0046983
Gso2g0861 273 ProSiteProfiles ACT domain profile. 200 273 IPR002912 -
Gso2g0861 273 Gene3D - 77 156 IPR036638 GO:0046983
Gso2g0861 273 PANTHER - 50 270 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0861 Gso-Chr2 9784926 9787265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0861 181 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 41.818 8.72e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0861 - - gmx:100810704 540.036