Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0837 ATGCTCAATTTTCAGAACTTGTCTCTCCTATTACTGGCGTTGGTGTTTCTGCCACTGAAGCTTGTGATCAGCGGGAACCAATGCACGGATAAATGTGGAGGGGTTAGTATTCAATTTCCATTTTATCTCAGAAACAGCAAGCTAAATCACACCGCCGAATATCCCCCTGGGTTCGATCTGCTATGTACGGAAAACAAGAAGACGTTGATACTTGAGCTGCCTAATGTTCCAACAAAATTGGCAGTCAGAAAAATTGATTACAAATCTCAGCAGATTCAAATCTACGACCCTGCAAATTGCCTTCCCTCTCAGCTATTGCAACTCAGCAACGCATCAATTTCTCCATTCCAATTCCCCTCATATGATTATGCTTTCAAGACTAGGCGTAACTTTTCCTTCTTCCGTTGCGATTCAATGTCGTCGTCGTGTCCTATTTTGTTACTTTCTTCTTACCTGGACGTTATTAGATTCCCTGAAATACTATCCTGCACCAAGGTGAAAGATGTTTTGTCTGCCAACTGGATGGATCAATATTCGCTTTATGACCCGACCGTGACTATAGAATGGTCGAAACCTGACTGCAAACACTGTGAAACACAAAACCAGAAATGTAAATGGAAGAATAGTACCAAAGGTGAAACTGAATGTTTCGTTTGCTCAACAAACACGACTCCCACATCAACTATTGTACTCATTGCTGCAGGAGGAATAGTTGGTTTGATGCTTTTGGTACTTACGGTCACTTGCATTGTTTGTGTGTATCACTATTATGAGAAGAAAGGAGAAGATCAAGCTAGAATAGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCCACGAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGCTTAGGGGAAGGAGCTCACGGAGTAGTGTTCAAAGGAATGCTCTCTCGAGAAATTCTGGTTGCTGTGAAGATACTCAACGACACAGTGGGAGATGGGAAGGATTTCATAAATGAAGTGGGAACCATAGGGAAAATTCATCACGTTAACGTTGTTCGCTTGCTTGGATTTTGTGCGGATGGGTTCCATCGCGCACTCGTTTATGATTTCTTCCCAAACGGGTCACTGCAGAGATTCTTGGCTCCACCAGACAAGAAGGGTGTTTTTCTTGGCTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAGAGGAATTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTGTTGGATGACAACTTGGTCCCAAAAATCACTGACTTTGGACTTTCCAAATTGTGTCCCAAAAATCAAAGCACAGTGTCAATGACTGCAGCCAGGGGAACTTTGGGCTACATTGCCCCTGAAGTTTTCTCAAGGAACTTTGGTAACGTGTCTTACAAGTCTGACATCTACAGTTATGGAATGTTACTGCTAGAAATGGTTGGAGGAAGAAAGAATATAGATGCTGAGGAAAGTTTTCAAGTTTTGTACCCTGAATGGATCCATAATTTGCTTGAAGGTAGAGACGTGCAAATTAGTGTTGAGGATGAGGGAGATGTTGAAATTGCAAAGAAACTCGCCATTGTAGGACTTTGGTGCATTCAGTGGAATCCAGTGAACCGTCCATCCATGAAAACGGTGGTACAAATGCTTGAAGGGGTTGGAGATGAATTAATTGCACCCCCTACTCCTTTTGACATCTCTGGATCTTCTAGAACAAATGATGATGTTCCAACAAGTCGTCAGAATTTCAAGTTGGAAGTTATTGATGAAATACAAGAGTAA 1812 0.4172 MLNFQNLSLLLLALVFLPLKLVISGNQCTDKCGGVSIQFPFYLRNSKLNHTAEYPPGFDLLCTENKKTLILELPNVPTKLAVRKIDYKSQQIQIYDPANCLPSQLLQLSNASISPFQFPSYDYAFKTRRNFSFFRCDSMSSSCPILLLSSYLDVIRFPEILSCTKVKDVLSANWMDQYSLYDPTVTIEWSKPDCKHCETQNQKCKWKNSTKGETECFVCSTNTTPTSTIVLIAAGGIVGLMLLVLTVTCIVCVYHYYEKKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGVVFKGMLSREILVAVKILNDTVGDGKDFINEVGTIGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDKKGVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDNLVPKITDFGLSKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIDAEESFQVLYPEWIHNLLEGRDVQISVEDEGDVEIAKKLAIVGLWCIQWNPVNRPSMKTVVQMLEGVGDELIAPPTPFDISGSSRTNDDVPTSRQNFKLEVIDEIQE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0837 603 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 48 602 - -
Gso2g0837 603 Pfam Wall-associated receptor kinase galacturonan-binding 28 96 IPR025287 GO:0030247
Gso2g0837 603 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Gso2g0837 603 ProSiteProfiles Protein kinase domain profile. 292 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0837 603 Pfam Protein kinase domain 296 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0837 603 Gene3D Phosphorylase Kinase; domain 1 266 366 - -
Gso2g0837 603 SUPERFAMILY Protein kinase-like (PK-like) 274 561 IPR011009 -
Gso2g0837 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 48 602 IPR045874 GO:0004672
Gso2g0837 603 Gene3D Transferase(Phosphotransferase) domain 1 367 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0837 Gso-Chr2 9446381 9448818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0837 193 573 Receptor kinase-like Gene Family AT1G66910 42.893 1.81e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso2g0837 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0837 - - gmx:100811260 1201.81