Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g0837 | ATGCTCAATTTTCAGAACTTGTCTCTCCTATTACTGGCGTTGGTGTTTCTGCCACTGAAGCTTGTGATCAGCGGGAACCAATGCACGGATAAATGTGGAGGGGTTAGTATTCAATTTCCATTTTATCTCAGAAACAGCAAGCTAAATCACACCGCCGAATATCCCCCTGGGTTCGATCTGCTATGTACGGAAAACAAGAAGACGTTGATACTTGAGCTGCCTAATGTTCCAACAAAATTGGCAGTCAGAAAAATTGATTACAAATCTCAGCAGATTCAAATCTACGACCCTGCAAATTGCCTTCCCTCTCAGCTATTGCAACTCAGCAACGCATCAATTTCTCCATTCCAATTCCCCTCATATGATTATGCTTTCAAGACTAGGCGTAACTTTTCCTTCTTCCGTTGCGATTCAATGTCGTCGTCGTGTCCTATTTTGTTACTTTCTTCTTACCTGGACGTTATTAGATTCCCTGAAATACTATCCTGCACCAAGGTGAAAGATGTTTTGTCTGCCAACTGGATGGATCAATATTCGCTTTATGACCCGACCGTGACTATAGAATGGTCGAAACCTGACTGCAAACACTGTGAAACACAAAACCAGAAATGTAAATGGAAGAATAGTACCAAAGGTGAAACTGAATGTTTCGTTTGCTCAACAAACACGACTCCCACATCAACTATTGTACTCATTGCTGCAGGAGGAATAGTTGGTTTGATGCTTTTGGTACTTACGGTCACTTGCATTGTTTGTGTGTATCACTATTATGAGAAGAAAGGAGAAGATCAAGCTAGAATAGAGAAATTCTTGGAGGATTATAGGGCAATGAAGCCCACGAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAAAGCTTAGGGGAAGGAGCTCACGGAGTAGTGTTCAAAGGAATGCTCTCTCGAGAAATTCTGGTTGCTGTGAAGATACTCAACGACACAGTGGGAGATGGGAAGGATTTCATAAATGAAGTGGGAACCATAGGGAAAATTCATCACGTTAACGTTGTTCGCTTGCTTGGATTTTGTGCGGATGGGTTCCATCGCGCACTCGTTTATGATTTCTTCCCAAACGGGTCACTGCAGAGATTCTTGGCTCCACCAGACAAGAAGGGTGTTTTTCTTGGCTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAGAGGAATTGAGTATCTCCATCTTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTGTTGGATGACAACTTGGTCCCAAAAATCACTGACTTTGGACTTTCCAAATTGTGTCCCAAAAATCAAAGCACAGTGTCAATGACTGCAGCCAGGGGAACTTTGGGCTACATTGCCCCTGAAGTTTTCTCAAGGAACTTTGGTAACGTGTCTTACAAGTCTGACATCTACAGTTATGGAATGTTACTGCTAGAAATGGTTGGAGGAAGAAAGAATATAGATGCTGAGGAAAGTTTTCAAGTTTTGTACCCTGAATGGATCCATAATTTGCTTGAAGGTAGAGACGTGCAAATTAGTGTTGAGGATGAGGGAGATGTTGAAATTGCAAAGAAACTCGCCATTGTAGGACTTTGGTGCATTCAGTGGAATCCAGTGAACCGTCCATCCATGAAAACGGTGGTACAAATGCTTGAAGGGGTTGGAGATGAATTAATTGCACCCCCTACTCCTTTTGACATCTCTGGATCTTCTAGAACAAATGATGATGTTCCAACAAGTCGTCAGAATTTCAAGTTGGAAGTTATTGATGAAATACAAGAGTAA | 1812 | 0.4172 | MLNFQNLSLLLLALVFLPLKLVISGNQCTDKCGGVSIQFPFYLRNSKLNHTAEYPPGFDLLCTENKKTLILELPNVPTKLAVRKIDYKSQQIQIYDPANCLPSQLLQLSNASISPFQFPSYDYAFKTRRNFSFFRCDSMSSSCPILLLSSYLDVIRFPEILSCTKVKDVLSANWMDQYSLYDPTVTIEWSKPDCKHCETQNQKCKWKNSTKGETECFVCSTNTTPTSTIVLIAAGGIVGLMLLVLTVTCIVCVYHYYEKKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGVVFKGMLSREILVAVKILNDTVGDGKDFINEVGTIGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDKKGVFLGWEKLQQIALGVARGIEYLHLGCDHRILHFDINPHNVLLDDNLVPKITDFGLSKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIDAEESFQVLYPEWIHNLLEGRDVQISVEDEGDVEIAKKLAIVGLWCIQWNPVNRPSMKTVVQMLEGVGDELIAPPTPFDISGSSRTNDDVPTSRQNFKLEVIDEIQE* | 604 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g0837 | 603 | PANTHER | MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN | 48 | 602 | - | - | |
Gso2g0837 | 603 | Pfam | Wall-associated receptor kinase galacturonan-binding | 28 | 96 | IPR025287 | GO:0030247 | |
Gso2g0837 | 603 | ProSitePatterns | Protein kinases ATP-binding region signature. | 298 | 320 | IPR017441 | GO:0005524 | |
Gso2g0837 | 603 | ProSiteProfiles | Protein kinase domain profile. | 292 | 568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso2g0837 | 603 | Pfam | Protein kinase domain | 296 | 558 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso2g0837 | 603 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 366 | - | - | |
Gso2g0837 | 603 | SUPERFAMILY | Protein kinase-like (PK-like) | 274 | 561 | IPR011009 | - | |
Gso2g0837 | 603 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 48 | 602 | IPR045874 | GO:0004672 | |
Gso2g0837 | 603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 367 | 568 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g0837 | Gso-Chr2 | 9446381 | 9448818 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g0837 | 193 | 573 | Receptor kinase-like Gene Family | AT1G66910 | 42.893 | 1.81e-106 | 333 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Gso2g0837 | Pkinase | 2.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g0837 | - | - | gmx:100811260 | 1201.81 |