Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0836 ATGTGTGTCTTACTTCCTTCCTTCCTCTTTTCACAATCAATGGTTACCTTTCTGGCTATCATAATTCTTGTGCTGCTATTCCAACAAACTTGCCTTGCCAAGCAGCATCACCACCACCCACCCTGTTATTCTTCATGTGGCGAAATTCACAACATAACGTATCCATTTCGACTAAAAGGCGACCCAATCAGCTGCGGCGATCAAGATTACGAATTAGATTGCGTTGAAAACGTGACAGTAATGACTCTATTTTCAGGGAAATTCCACGTGCAGGAAATAAATTACAAGAGGTACGAGATCCGGTTGACCGATGCTGGTGTGGTGGAGGACATTGCTTGCTCAATTCCTCGTTATTTCTTTAATCTCTACAATTTCACTTACATCGGTGGTCTTAACTATTCTGCATATGGTCCGTTAAGTTTCTCGGGGTATCCTCAGTATGCGGTGTTTCTAAACTGCACTACCCCAGTCACCGATGATCCTCGATACGTAGCTGTGAAGGTCAACGGTAATTGTGATTCGAGTTCCGTAGGCCATATCTATGCCATTCTGGTCACAGACGATGATGATCGCTTTGGGTTTACACTGACGGACATCAAGGTTGGGTGCCGATTGAAGGTTGCTACATTTGCAAACTGGAAATATAATAACAGGGAGGTTAACGTTTCTTATTCTGATATCAACAAGTGGCTGCACCACGGAATTTGGATGTCTTGGTTCTTTCCAGTTATTTGTAGGGACCGATGCGGAAAGGGTGTGAGTTGCTACATCGATCAAACCACGCGAGAAACTCGATGTGCAGATAGCTACTGCCAAATCTTTGGCATTCAAACATACAAGTGCGGAATTCGTAATCAGATTCTTGAATATATGCGGCAAATTCTTGGCTACACAGTAGGTTATCTTAAAAGCGTTATAATGGGATATGTAAATAGAATAAGATATCGTGAGCAACTAACAAGCTGGGATAGTGAAGCAGAATTCTTTGAACAAAATGCTATAGCAATATTCCTGGCAACCAGATTGCTATTTGGAATCACACTTTTACTAATGCTATATATCTATATGTGGCGACGTAGACATTATTCAATGTATGAAAACATTGAAATTTTTTTGCTAGATAGCAATCTAAATCCTATTAGGTATGAATACAGAGAAATAAAAAAAATGACCAAAGATTTCAAAGTGAAATTGGGTGAAGGAGGTTTCGGCTCTGTATACAAAGGAAAACTTCGAAGCGGGCTAGATGTGGCAATAAAGATGTTGACCAAATCCAAAACTAGAGGACAAGATTTTATCAGTGAAGTGGCTACAATTGGAAGAATACATCACGTGAATGTGGTGCGTCTTATTGGATATTGTGCTGAAGGAGAAAAGCATGCTCTAGTTTATGAATTCATGCCTAATGGTTCATTGGATAAATACATTTTCTCTAAAGAAGAAAGTGTCTCCTTAAGTTATGACAAAACATATGAAATATGTCTTGGCATAGCTCGTGGGATTGCTTATTTGCATCAAGATTGTGATGTGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGATGATAACTTCATTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTATATCCTATCAAAGATAAGTCAATTATTTTAACTGGACTAAGAGGAACTTTTGGTTACATGGCTCCAGAATTATTCTACAAAAATATTGGTGGAGTGTCATATAAGGCAGACGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGGAAGTAGAAGGAGGAACTCAAATCCTCACACAGAGCACTCAAGCCAACATTTCTTCCCCTTTTGGATCTATGATCATTTTATGGAAGAAAAGGATATTCACATGGAAGAGGTCTCAGAAGAGGATAAGATTCTAGTGAAAAAGATGTTCATAGTTTCCCTTTGGTGTATACAATTAAAACCAAATGATCGTCCTTCAATGAAGAAGGTTGTAGAGATGCTTGAAGGAAAGGTTGAAAATATTGATATGCCTCCAAAGCCTGTTTTTTATCCCCATGAAACAACAATCGACTCTGATCAAGCATCATGGAGTGATTCAACTAGTTCTTGCAAGAACATTGACAAAACCAAGTCCAATTTTTCACTGGAGAACAACTCTTGA 2145 0.3874 MCVLLPSFLFSQSMVTFLAIIILVLLFQQTCLAKQHHHHPPCYSSCGEIHNITYPFRLKGDPISCGDQDYELDCVENVTVMTLFSGKFHVQEINYKRYEIRLTDAGVVEDIACSIPRYFFNLYNFTYIGGLNYSAYGPLSFSGYPQYAVFLNCTTPVTDDPRYVAVKVNGNCDSSSVGHIYAILVTDDDDRFGFTLTDIKVGCRLKVATFANWKYNNREVNVSYSDINKWLHHGIWMSWFFPVICRDRCGKGVSCYIDQTTRETRCADSYCQIFGIQTYKCGIRNQILEYMRQILGYTVGYLKSVIMGYVNRIRYREQLTSWDSEAEFFEQNAIAIFLATRLLFGITLLLMLYIYMWRRRHYSMYENIEIFLLDSNLNPIRYEYREIKKMTKDFKVKLGEGGFGSVYKGKLRSGLDVAIKMLTKSKTRGQDFISEVATIGRIHHVNVVRLIGYCAEGEKHALVYEFMPNGSLDKYIFSKEESVSLSYDKTYEICLGIARGIAYLHQDCDVQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPIKDKSIILTGLRGTFGYMAPELFYKNIGGVSYKADVYSFGMLLMEMGSRRRNSNPHTEHSSQHFFPFWIYDHFMEEKDIHMEEVSEEDKILVKKMFIVSLWCIQLKPNDRPSMKKVVEMLEGKVENIDMPPKPVFYPHETTIDSDQASWSDSTSSCKNIDKTKSNFSLENNS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0836 714 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 691 IPR045874 GO:0004672
Gso2g0836 714 Pfam Protein tyrosine and serine/threonine kinase 395 662 IPR001245 GO:0004672|GO:0006468
Gso2g0836 714 SUPERFAMILY Protein kinase-like (PK-like) 377 663 IPR011009 -
Gso2g0836 714 ProSiteProfiles Protein kinase domain profile. 392 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0836 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Gso2g0836 714 Gene3D Phosphorylase Kinase; domain 1 373 466 - -
Gso2g0836 714 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 691 - -
Gso2g0836 714 SMART serkin_6 392 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0836 714 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Gso2g0836 714 MobiDBLite consensus disorder prediction 688 714 - -
Gso2g0836 714 CDD STKc_IRAK 398 664 - -
Gso2g0836 714 Pfam Wall-associated receptor kinase galacturonan-binding 42 104 IPR025287 GO:0030247
Gso2g0836 714 Gene3D Transferase(Phosphotransferase) domain 1 467 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0836 Gso-Chr2 9441151 9445888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0836 381 695 Receptor kinase-like Gene Family AT5G38280 49.221 2.11e-100 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso2g0836 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0836 - - gmx:100170745 1467.98