Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0790 ATGGTGGGGAACGATGACGCGGGCCACCTCTCCGCCTCCCGGAAAATGTTCTGGCGGTCGGCGTCGTGGTCCTCCTCGCGCACCGCCGCCGGAAATGCCTCTTCCGGCGAGGCGGAGAAGGGCTTCGCTGATTCCGGCGCCGCCGACGGTCCCCACGGCCAGAACCGGCGGTTTGGTCCGCCGCCGCTGACGCCTCGGTCGCAGCAGAATTGCAAGGCGCGGTCTTGCCTGCCGCCGCTGCAGCCACTCTCCATCGCCCGGCGGAGCCTCGACGAGTGGCCGAAGGCGGGCTCCGACGACATCGGCGAGTGGCCGCAGCCGCCCACCACCCCCGGCGGGAGAGCTAATGGTAGCAATGGTGAAAGGTTGAAACTTGATTTGTCTTCCATTCAGCATAACAACCCTGATCATAGTAGGAGTAACAATGGAAATGGGCTTGTGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAAGTTGCTGATCATGTGTACCTTGGTGGTGATGCTGTTGCTAGGGATAGGGACATTTTGAAGCATAACGGTATCACTCATGTGTTGAATTGTGTGGGATTTGTGTGTCCTGAGTACTTTAAGGCTGATTTTGTTTATAGGACTTTGTGGCTGCAGGATAGTCCCTCTGAGGACATTACTAGTATTTTGTATGACGTGTTTGACTACTTTGAGGATGTTAGGGAGCAAGGTGGGAGGGTATTTGTGCACTGTTGTCAAGGGGTGTCTAGGTCTACTTCCTTGGTCATTGCTTACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTTAGTGAAGGCAGCGAGAGGGATTGCTGATCCGAATATGGGGTTTGCTTGCCAGCTGTTGCAGTGCCAGAAGAGGGTTCATGCTGTCCCTCTTAGCCCTAGCTCTTTGCTGAGGATGTATAGAATTGCTCCACACTCACCCTATGATCCTTTGCATCTGGTTCCAAAAATGTTAACGGATCCTTCATTGGCTGCATTGGACTCCAGAGGTGCATTTATCGTGCATATTCCTTCAGCCATATATGTTTGGATTGGTAAGGATTGTGAGGCCATCATGGAGAGGGATGCCAGAGGGGCAGTTGGCCAGATTGTCCGGTATGAGAAGGTGCAAGGGCCTAATGTGATAATTAAGGAAGGTGAGGAGCCTGTTTCCTTTTGGGATGCTTTTTCAAGTTTTCTGCCCTTGATGGACAAGGACAAATCTGGCAACAGAGTAGAAGAGGGAAAAAGATTAACCAGTCAAGTTTTACCTGGTGAGAGGAGGGTGGACTCATACAATGTTGATTATGAAGTTTTCAAAAAAGCAATCACCGGAGGCTTTGTGCCTCCATTTGCTTCGTCAGGTGAACATGAAACACATCTGCCTGCAAGAGAGAGTAGCTGGAGTGTTAAAGTTTCCTATACTGGCACAAAGGAGTTTGTTTCAGCCCCTCGGTTATCCTTCCCAAGGGTTTATTCAGATTCCATGTTGTGTATTTATACGTCAGCAAATGCAAATTTGTCTCCATCATCATCCTTGTCCTCATCGTCATCATCTGTATCATCATCCTCTTCGCCGTCTTATGTTTCTCCAGATTCCATTTCTTCTGATTCTAGCCCTCATTCAAAGTCTTTGTCAGAAGTGTCCCCAGATTCTTCCTCCATAGTTTTGACTTCTATTCCTGTATCTTCATGTTTGTCTAATTTTTCTAATTTGTCAATCACATCATATTCTACTCCTAAAACAGTGTCTAACAGTACAGATGTCCTTGGGGTCAAGTTATCACATCCCTGGTCTCAGTCAGCCTCTCTACCGTTGAAGAAATCATCAACTTCCCTTGCCGAACGGAGAGGTAACTTGTCAAAATTTTTGAAGTTGCCACTAATGAATGATAAGACACAAGTAACAGATAAATCGTCAACTTCTCATGCTAGTCGAGAATATGACATTCTTGTTAATGGGAATGTTAGCTATCTGCAACAATCCGATAATAAAGATTATTTTTGTAAGTCTAACAACCATGCCAAGGATGGAGGTGTGAATTCAATTCAAAAGTGTGAGCTGGCATTGTGTCCAAGCATTGCTGGTAGCATGGACCTCAAGGAATTTAGTCAGTCTACATTGAAGCGAACTAATGAAAGTGGCTTACTGCAGTGTAATGTCGCACAAACTTGGGTATATCACTGGCCCAGTCTACAAAAGATTGAGACATTTGGTGCAAGTCATTTGGATTCTAAAGCTGCTTTTGTCATATTCTCTCCCAGTATGCATGTACATCCAGGAAACATTTTATATATCTGGGTAGGGAGGTCTTTCAATTGTGATGCTTCACAGGTTCACTTAGATATTGATAAACAGACCGATTATGTAAGAATTGCTGACTGGAATCAAATTGGTTGTGATCTCCTTGCTCAGTTTAGTTTGCCAAAGAACACAGTCATGAAGGTTGTTAAAGAGAATGAAGAACCTTCAGAATTCCTTGATCTACTGAATTCATTGTAA 2517 0.4585 MVGNDDAGHLSASRKMFWRSASWSSSRTAAGNASSGEAEKGFADSGAADGPHGQNRRFGPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTTPGGRANGSNGERLKLDLSSIQHNNPDHSRSNNGNGLVKRDRIAFFDKECSKVADHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSLAALDSRGAFIVHIPSAIYVWIGKDCEAIMERDARGAVGQIVRYEKVQGPNVIIKEGEEPVSFWDAFSSFLPLMDKDKSGNRVEEGKRLTSQVLPGERRVDSYNVDYEVFKKAITGGFVPPFASSGEHETHLPARESSWSVKVSYTGTKEFVSAPRLSFPRVYSDSMLCIYTSANANLSPSSSLSSSSSSVSSSSSPSYVSPDSISSDSSPHSKSLSEVSPDSSSIVLTSIPVSSCLSNFSNLSITSYSTPKTVSNSTDVLGVKLSHPWSQSASLPLKKSSTSLAERRGNLSKFLKLPLMNDKTQVTDKSSTSHASREYDILVNGNVSYLQQSDNKDYFCKSNNHAKDGGVNSIQKCELALCPSIAGSMDLKEFSQSTLKRTNESGLLQCNVAQTWVYHWPSLQKIETFGASHLDSKAAFVIFSPSMHVHPGNILYIWVGRSFNCDASQVHLDIDKQTDYVRIADWNQIGCDLLAQFSLPKNTVMKVVKENEEPSEFLDLLNSL* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0790 838 MobiDBLite consensus disorder prediction 94 121 - -
Gso2g0790 838 Gene3D Protein tyrosine phosphatase superfamily 132 300 IPR029021 -
Gso2g0790 838 SMART dsp_5 158 297 IPR020422 GO:0006470|GO:0008138
Gso2g0790 838 SUPERFAMILY Actin depolymerizing proteins 724 837 - -
Gso2g0790 838 ProSiteProfiles Dual specificity protein phosphatase domain profile. 158 300 IPR020422 GO:0006470|GO:0008138
Gso2g0790 838 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 832 - -
Gso2g0790 838 MobiDBLite consensus disorder prediction 512 554 - -
Gso2g0790 838 MobiDBLite consensus disorder prediction 61 75 - -
Gso2g0790 838 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 299 IPR029021 -
Gso2g0790 838 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 217 278 IPR000387 GO:0016311|GO:0016791
Gso2g0790 838 MobiDBLite consensus disorder prediction 19 33 - -
Gso2g0790 838 Gene3D Severin 309 405 IPR029006 -
Gso2g0790 838 CDD DSP 159 293 - -
Gso2g0790 838 PANTHER MKPA PROTEIN 1 832 - -
Gso2g0790 838 SUPERFAMILY Actin depolymerizing proteins 305 407 - -
Gso2g0790 838 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Gso2g0790 838 MobiDBLite consensus disorder prediction 19 78 - -
Gso2g0790 838 Pfam Dual specificity phosphatase, catalytic domain 166 296 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0790 Gso-Chr2 8443168 8447736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0790 2 194 Protein tyrosine phosphatase (PTP) family AT3G55270 60.622 3.58e-65 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0790 - - gmx:100790177 1627.84