Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0786 ATGGCAATATATAGAATTGCAATTGGGACCCCTGGAGAGGCTGGCCAACCTGATGCAATCAGAGCAGCATTTGCAGAATTCTTCTCCATGATCATTTTTGTTTTTGCTGGGGAAGGATCTGGCATGGCTTACAGCAAACTTACCAACAATGGACCTGCAACACCAGCTGGTCTCATTGCTGCATCACTATCTCATGCATTTGGGCTTTTTGTGGCTGTCTCTGTTGGGGCAAACATTTCTGGTGGTCATGTAAACCCTGCAGTCACATTTGGTGCCTTCATAGGAGGAAACATAACCCTGTTGAGAAGTATTTTGTATTGGATTGCACAGTTGCTTGGTTCAGTTGTTGCATGCATTCTTCTCAAGTCTGCAACCGGTGGAATGGAAACAACAGGCTTTTCCCTATCACCTGGTGTGTCTGTCTGGAATGCATTAGTTTTTGAAATTGTGATGACTTTTGGGTTGGTATATACAGTTTATGCCACAGCAGTGGACCCAAAGAAAGGGAATGTGGGAGTTGTTGCACCAATTGCAATTGGCTTTATTGTGGGTGCCAACATCTTAGTTGGTGGTGCATTTGATGGTGCATCCATGAACCCAGCTGTGTCCTTTGGCCCTGCTGTGGTTACATGGTCATGGACCCATCACTGGGTCTATTGGGTTGGTCCATTCATTGGTGCAGCAATTGCTGCAGTAATCTATGATAATATCTTCATTGGAGATGATGGTCATGAACCTCTTTCAAGCAGTGATTTCTAG 759 0.448 MAIYRIAIGTPGEAGQPDAIRAAFAEFFSMIIFVFAGEGSGMAYSKLTNNGPATPAGLIAASLSHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRSILYWIAQLLGSVVACILLKSATGGMETTGFSLSPGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGVVAPIAIGFIVGANILVGGAFDGASMNPAVSFGPAVVTWSWTHHWVYWVGPFIGAAIAAVIYDNIFIGDDGHEPLSSSDF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0786 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 SUPERFAMILY Aquaporin-like 17 240 IPR023271 -
Gso2g0786 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0786 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Gso2g0786 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
Gso2g0786 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Gso2g0786 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0786 Gso-Chr2 8414872 8416584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0786 1 252 Major Intrinsic Protein MIP AT4G01470 84.524 3.45e-155 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0786 K09873 - gmx:100788583 506.138